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IVF0006546 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006546
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr11:23229781..23230772
RNA-Seq ExpressionIVF0006546
SyntenyIVF0006546
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]2.40e-8975.81Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        MLRKYTSEHDCSLSTAQSSH+                FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSEMMHHGHGFLRRYE
        CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLK                            SEMMHHGHGFLRRYE
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSEMMHHGHGFLRRYE

KAA0041797.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]6.41e-8883.12Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        MLRKYTSEHDC LSTAQSSH+                FMSID SI KEIVHK RTNLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNN
         TCTALE+DD GHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQD NN
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNN

TYJ95626.1 uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa]1.51e-10289.94Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        MLRKYTSEHDCSLSTAQSSH+                FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
        CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]7.88e-8489.71Show/hide
Query:  FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISV
        FMS + SIP EIVHKARTNLG+NISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP TCTALEMDDSGHFKFCFMAFGASIEGWKYC+PII V
Subjt:  FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISV

Query:  DGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSE
        DG FLKCKFGGILLTASSQD NNQIFPLAF IVDS+
Subjt:  DGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSE

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]1.33e-9157.75Show/hide
Query:  LNIGFSSSVSNDEVIRDISYYSDLKEKRLFESKE------------NNFQFRTTVLNLRSFEFRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLST
        L +G SS  SND+VI+++ +  DLKEK +F SKE             NFQFRTT  N +SFE +CLQEGC+ YVRAS YKKS+LWMLRKY S+H+C ++T
Subjt:  LNIGFSSSVSNDEVIRDISYYSDLKEKRLFESKE------------NNFQFRTTVLNLRSFEFRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLST

Query:  AQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFK
         QS H                 F+S D S+P++IV+KART LGVNISY+KAWR KEH+++ L+GD  +SY+LIP+FF +L + NP T TAL++D++GHFK
Subjt:  AQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFK

Query:  FCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSE
         CFM  GASIEGW+Y  P ISVDGTFLK KFGG LL+AS+ D NN IFPLAFAIVDSE
Subjt:  FCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSE

TrEMBL top hitse value%identityAlignment
A0A5A7SVW4 Uncharacterized protein6.2e-7175.81Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        MLRKYTSEHDCSLSTAQSSH+                FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSEMMHHGHGFLRRYE
        CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLK                            SEMMHHGHGFLRRYE
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSEMMHHGHGFLRRYE

A0A5A7T6M8 DNA/RNA polymerases superfamily protein6.5e-6879.88Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        ML+KYTS+HDCSLSTAQS  +                 MS D SIPKEIVHKA TNLGVNISY+K WRAKEHMVKIL GDTVESYALIPRFF+KLV+SNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
         TCTALEMDDSG FKFCFMAF ASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQD NNQIFPLAFAI
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI

A0A5A7TJB7 Protein FAR1-RELATED SEQUENCE 2-like1.7e-6883.12Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        MLRKYTSEHDC LSTAQSSH+                FMSID SI KEIVHK RTNLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNN
         TCTALE+DD GHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQD NN
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNN

A0A5D3B9S0 Uncharacterized protein2.3e-8189.94Show/hide
Query:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
        MLRKYTSEHDCSLSTAQSSH+                FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP
Subjt:  MLRKYTSEHDCSLSTAQSSHI----------------FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNP

Query:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
        CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
Subjt:  CTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI

A0A5D3BUA2 MULE domain-containing protein1.6e-6682.8Show/hide
Query:  FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISV
        FMS D SIPKEIVHKA TNLGVN SY+KAWRAKEHMVKILHGDTVE YALIPRFFDKLV+SNP TCTALEMDD+GHFKFCFM FGASIEGWKYCRPIISV
Subjt:  FMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISV

Query:  DGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSEMMHHGHGFLRRYEVVFQSELI
        D TFLKCKFGGI LTASSQD NNQIFPLAFAIVDSE       F  +    FQSELI
Subjt:  DGTFLKCKFGGILLTASSQDDNNQIFPLAFAIVDSEMMHHGHGFLRRYEVVFQSELI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase1.3e-1228.57Show/hide
Query:  CLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLSTAQSSHI-FMSIDCSIPKEIVHKARTNLGVNIS-YEKAWR---------------------AKEH
        C +  CK  + ASR ++  L+ + + +  HDC        H+     +C IP +I    R    ++ +  +K W                      AK  
Subjt:  CLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLSTAQSSHI-FMSIDCSIPKEIVHKARTNLGVNIS-YEKAWR---------------------AKEH

Query:  MVKILHGDTVESYALIPRFFDKLVKSNPCTC----TALEMD-DSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAF
         +K   GD  +S+ LIP+    L  SN         +L  D +   F+  F AF  SI+G+++CRP+I VD   L  K+   L+ AS+ D  NQ FPLAF
Subjt:  MVKILHGDTVESYALIPRFFDKLVKSNPCTC----TALEMD-DSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAF

Query:  AIVDSEMMHHGHGFLRR
        A+     +     FL R
Subjt:  AIVDSEMMHHGHGFLRR

AT1G64255.1 MuDR family transposase7.4e-1630Show/hide
Query:  FRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDC----------SLSTAQSSHIFMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVE
        F C++  CK  + A+R KK  L  + KYT  H C             T +       +      E+    +  +G  +       AKE  +K + GD  +
Subjt:  FRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDC----------SLSTAQSSHIFMSIDCSIPKEIVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVE

Query:  SYALIPRFFDKLVKSNPCTCT-ALEMDDSGHF-KFC--FMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
        S+   P+    L  SN        ++  + +F  FC  F AF  SIEG+++CRP+I VD   L C++   L+ AS  D  N+ FPLAFA+
Subjt:  SYALIPRFFDKLVKSNPCTCT-ALEMDDSGHF-KFC--FMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI

AT1G64260.1 MuDR family transposase4.8e-1528.43Show/hide
Query:  FEFRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLSTAQSSHIFMSIDCSIPKEIVHKARTNLGVNISYEKAW---------------RAKEHMVKI
        + F C++  CK  +RA+R ++  L  + KYT  H CS           + D     EI    R    ++I+  K W                 K  ++K 
Subjt:  FEFRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLSTAQSSHIFMSIDCSIPKEIVHKARTNLGVNISYEKAW---------------RAKEHMVKI

Query:  LHGDTVESYALIPRFFDKLVKSNPCTC----TALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI
        + GD  +S+ ++P+       SN              D   F+  F +F  SIEG+++CRP+I VD   L  K+   L+ AS  D  N+ FPLAFA+
Subjt:  LHGDTVESYALIPRFFDKLVKSNPCTC----TALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQIFPLAFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTGAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATTATTCTGATTTGAAGGAAAAACGTTTATTTGAAAGTAAAGAAAA
CAACTTTCAATTTAGGACTACAGTATTAAATTTGAGATCTTTTGAATTTAGATGTCTGCAAGAAGGCTGCAAATTGTATGTAAGAGCATCTCGTTATAAGAAGAGTGATT
TGTGGATGCTACGAAAATACACTTCTGAGCATGATTGTTCATTGAGTACTGCCCAAAGTTCTCACATATTCATGTCTATTGATTGTTCCATTCCTAAAGAGATTGTTCAT
AAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACGAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACACGGTGATACAGTTGAATCGTATGCATTGAT
TCCAAGATTCTTTGATAAATTGGTTAAATCTAACCCATGTACATGCACTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAA
TTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCTTATTAACAGCTTCATCACAAGATGATAATAATCAA
ATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAATGATGCATCATGGACATGGTTTTTTGAGAAGATACGAAGTAGTTTTTCAGAGCGAGCTAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACTGAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATTATTCTGATTTGAAGGAAAAACGTTTATTTGAAAGTAAAGAAAA
CAACTTTCAATTTAGGACTACAGTATTAAATTTGAGATCTTTTGAATTTAGATGTCTGCAAGAAGGCTGCAAATTGTATGTAAGAGCATCTCGTTATAAGAAGAGTGATT
TGTGGATGCTACGAAAATACACTTCTGAGCATGATTGTTCATTGAGTACTGCCCAAAGTTCTCACATATTCATGTCTATTGATTGTTCCATTCCTAAAGAGATTGTTCAT
AAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACGAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACACGGTGATACAGTTGAATCGTATGCATTGAT
TCCAAGATTCTTTGATAAATTGGTTAAATCTAACCCATGTACATGCACTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAA
TTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCTTATTAACAGCTTCATCACAAGATGATAATAATCAA
ATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAATGATGCATCATGGACATGGTTTTTTGAGAAGATACGAAGTAGTTTTTCAGAGCGAGCTAATTTAG
Protein sequenceShow/hide protein sequence
MSLNIGFSSSVSNDEVIRDISYYSDLKEKRLFESKENNFQFRTTVLNLRSFEFRCLQEGCKLYVRASRYKKSDLWMLRKYTSEHDCSLSTAQSSHIFMSIDCSIPKEIVH
KARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGILLTASSQDDNNQ
IFPLAFAIVDSEMMHHGHGFLRRYEVVFQSELI