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IVF0006549 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006549
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome locationchr10:8509976..8510663
RNA-Seq ExpressionIVF0006549
SyntenyIVF0006549
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037362.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]6.52e-15100Show/hide
Query:  LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL
        LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL
Subjt:  LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL

KAA0039603.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]6.66e-1351.02Show/hide
Query:  LEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKMTILSAL
        +EEDD I FN +K EDDD I  +  + E        +DD IDS +IEDED DP DC  I EDEDDDP+ C HIE D DD+ L Y   +   M IL AL
Subjt:  LEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKMTILSAL

KAA0047572.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]1.27e-1572.88Show/hide
Query:  EDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKMTI--LSALTHVRR
        EDEDEDP DC+ I+EDEDDDPL+  HIEED DD+PLD NTCEKMKM I  LS  T VRR
Subjt:  EDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKMTI--LSALTHVRR

TYK18365.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]6.43e-1540Show/hide
Query:  KMMIEFEDGDITKLDWRWRSETAPTYWLQLLEEDDPI-------------HFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCK
        + + E EDG         +S T PTY  Q +EEDDPI             +F+  +DEDDDPI  D  EDE        +DDLI     EDED+D   C 
Subjt:  KMMIEFEDGDITKLDWRWRSETAPTYWLQLLEEDDPI-------------HFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCK

Query:  RIKED----EDDDPLSCG--------HIEEDGDDNPLDYNTCEKMKMTILSALTH
         +K +    EDDD   C         HI ED D++PL  N CEKMKM IL   TH
Subjt:  RIKED----EDDDPLSCG--------HIEEDGDDNPLDYNTCEKMKMTILSALTH

XP_008463661.1 PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]5.83e-1435.71Show/hide
Query:  EEDDPIHFNCVKDEDDDPIGCDRFEDENDN------CLDED----------------EDDLIDSGNIEDE------------------------------
        E+DD I+FN ++DEDDDPIGCDR +D++D+      CLDED                EDD    GNIEDE                              
Subjt:  EEDDPIHFNCVKDEDDDPIGCDRFEDENDN------CLDED----------------EDDLIDSGNIEDE------------------------------

Query:  DEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCE--------------KMKMTILSALTHVRR
        D DP  C  I++++ DDPL CG+IE++ +D+PLD N+ E              KM M IL A T+ +R
Subjt:  DEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCE--------------KMKMTILSALTHVRR

TrEMBL top hitse value%identityAlignment
A0A1S3CK92 prostatic spermine-binding protein-like1.5e-1035.71Show/hide
Query:  EEDDPIHFNCVKDEDDDPIGCDRFEDE------NDNCLD----------------EDEDDLIDSGNIED------------------------------E
        E+DD I+FN ++DEDDDPIGCDR +D+      +D+CLD                EDEDD    GNIED                              E
Subjt:  EEDDPIHFNCVKDEDDDPIGCDRFEDE------NDNCLD----------------EDEDDLIDSGNIED------------------------------E

Query:  DEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCE--------------KMKMTILSALTHVRR
        D DP  C  I++++ DDPL CG+IE++ +D+PLD N+ E              KM M IL A T+ +R
Subjt:  DEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCE--------------KMKMTILSALTHVRR

A0A5A7T1P1 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like6.6e-11100Show/hide
Query:  LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL
        LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL
Subjt:  LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL

A0A5A7TVT5 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.1e-1072.88Show/hide
Query:  EDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKM--TILSALTHVRR
        EDEDEDP DC+ I+EDEDDDPL+  HIEED DD+PLD NTCEKMKM   ILS  T VRR
Subjt:  EDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKM--TILSALTHVRR

A0A5D3D493 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like6.6e-1140.14Show/hide
Query:  KMMIEFEDGDITKLDWRWRSETAPTYWLQLLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL-----DEDEDDLIDSGNIEDEDEDPPDCKRIKED---
        + + E EDG         +S T PTY  Q +EEDDPI F+  +D   D I  D  EDE+D+ +     ++++DDLI     EDED+D   C  +K +   
Subjt:  KMMIEFEDGDITKLDWRWRSETAPTYWLQLLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCL-----DEDEDDLIDSGNIEDEDEDPPDCKRIKED---

Query:  -EDDDPLSCG--------HIEEDGDDNPLDYNTCEKMKMTILSALTH
         EDDD   C         HI ED D++PL  N CEKMKM IL   TH
Subjt:  -EDDDPLSCG--------HIEEDGDDNPLDYNTCEKMKMTILSALTH

A0A5D3DSX1 Prostatic spermine-binding protein-like8.0e-0944.76Show/hide
Query:  EEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCKRIKEDEDDDPLSCGHIEEDG----------DDNPLDYNTCEKMK
        E+DDP+   C KDEDDDP+ C   EDE     D+++DDLI   +IEDED+DP  C  I EDED++ L C  I++D           DD+P      +KMK
Subjt:  EEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCKRIKEDEDDDPLSCGHIEEDG----------DDNPLDYNTCEKMK

Query:  MTILS
        M +LS
Subjt:  MTILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATGATCGAATTTGAAGATGGAGATATCACCAAGCTTGATTGGAGATGGAGAAGCGAGACTGCACCAACATATTGGTTGCAGCTCCTGGAAGAAGATGATCC
TATCCACTTCAACTGTGTTAAAGATGAAGATGATGATCCCATCGGTTGCGATCGCTTTGAAGATGAAAATGATAATTGTCTCGATGAAGATGAAGATGATCTTATCGACA
GCGGCAACATTGAAGACGAAGATGAAGATCCTCCCGACTGCAAGCGCATTAAAGAAGATGAAGATGATGATCCTCTCAGTTGCGGACACATTGAAGAAGATGGAGATGAT
AATCCTCTTGACTACAACACGTGTGAGAAGATGAAGATGACGATCCTCTCGGCTCTAACACATGTGAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATGATCGAATTTGAAGATGGAGATATCACCAAGCTTGATTGGAGATGGAGAAGCGAGACTGCACCAACATATTGGTTGCAGCTCCTGGAAGAAGATGATCC
TATCCACTTCAACTGTGTTAAAGATGAAGATGATGATCCCATCGGTTGCGATCGCTTTGAAGATGAAAATGATAATTGTCTCGATGAAGATGAAGATGATCTTATCGACA
GCGGCAACATTGAAGACGAAGATGAAGATCCTCCCGACTGCAAGCGCATTAAAGAAGATGAAGATGATGATCCTCTCAGTTGCGGACACATTGAAGAAGATGGAGATGAT
AATCCTCTTGACTACAACACGTGTGAGAAGATGAAGATGACGATCCTCTCGGCTCTAACACATGTGAGAAGATGA
Protein sequenceShow/hide protein sequence
MKMMIEFEDGDITKLDWRWRSETAPTYWLQLLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDD
NPLDYNTCEKMKMTILSALTHVRR