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IVF0006555 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006555
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein H
Genome locationchr09:12871603..12871824
RNA-Seq ExpressionIVF0006555
SyntenyIVF0006555
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
InterPro domainsIPR001056 - Photosystem II reaction centre protein H
IPR036863 - Photosystem II reaction centre protein H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM91195.1 photosystem II phosphoprotein [Lagenaria siceraria]4.31e-2976.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
QHB75993.1 photosystem II protein H [Cucumis melo subsp. melo]4.31e-2975.34Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RT+V D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
YP_004841812.1 photosystem II phosphoprotein [Cucumis melo subsp. melo]4.31e-2975.34Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RT+V D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
YP_009326018.1 photosystem II protein H [Citrullus lanatus]3.03e-2976.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
YP_009346513.1 photosystem II phosphoprotein [Cucumis x hytivus]1.75e-2873.97Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RT+V D LKPL S+YGKVA GWGTTPLM V MGLF +FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
TrEMBL top hitse value%identityAlignment
A0A1P8LE91 Photosystem II reaction center protein H3.8e-2176.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
A0A1P8LEZ9 Photosystem II reaction center protein H3.8e-2176.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
A0A343A8D9 Photosystem II reaction center protein H3.8e-2176.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
A0A7T3USX9 Photosystem II phosphoprotein3.8e-2176.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
X2F4E0 Photosystem II reaction center protein H3.8e-2176.71Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RTIV D LKPL S+YGKVA GWGTTPLM V MGLFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
SwissProt top hitse value%identityAlignment
A0ZZ64 Photosystem II reaction center protein H2.1e-2171.23Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT++ SS  GP RT+V DFLKPL S+YGKVA GWGTTPLM V M LFA+FL IILEIYNSS LL+ IS N
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
Q2L934 Photosystem II reaction center protein H2.1e-2171.23Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT++ SS  GP RT+V DFLKPL S+YGKVA GWGTTPLM V M LFA+FL IILEIYNSS LL+ IS N
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
Q4VZI9 Photosystem II reaction center protein H6.7e-2373.97Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+D+SS  GP RT+V D LKPL S+YGKVA GWGTTPLM V M LFA+FLCIILEIYNSS LL+ ISSN
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
Q7FNS3 Photosystem II reaction center protein H6.3e-2171.23Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT++NSS  GP RT V D LKPL S+YGKVA GWGTTPLM V M LFA+FL IILEIYNSS LL+ IS N
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
Q9XQR3 Photosystem II reaction center protein H4.8e-2169.86Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT++NSS  GP RT V D LKPL S+YGKVA GWGTTPLM + M LFA+FL IILEIYNSS LL++IS N
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
Arabidopsis top hitse value%identityAlignment
ATCG00710.1 photosystem II reaction center protein H7.1e-2067.12Show/hide
Query:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN
        M TQT+++SS  GP  T V   LKPL S+YGKVA GWGTTPLM V M LFA+FL IILEIYNSS LL+ IS N
Subjt:  MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTACACAAACTATTGACAATAGTTCTACATTTGGGCCAATACGAACTATTGTAGATGATTTCTTGAAACCATTGTTCTCGAAATATGGTAAAGTGGCTCATGGGTG
GGGAACTACACCTTTAATGTGTGTCACAATGGGTTTATTTGCGATGTTCCTATGTATTATTTTGGAGATTTATAATTCTTCCACTTTACTGAATAGAATTTCAAGTAATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGGTACACAAACTATTGACAATAGTTCTACATTTGGGCCAATACGAACTATTGTAGATGATTTCTTGAAACCATTGTTCTCGAAATATGGTAAAGTGGCTCATGGGTG
GGGAACTACACCTTTAATGTGTGTCACAATGGGTTTATTTGCGATGTTCCTATGTATTATTTTGGAGATTTATAATTCTTCCACTTTACTGAATAGAATTTCAAGTAATT
AA
Protein sequenceShow/hide protein sequence
MGTQTIDNSSTFGPIRTIVDDFLKPLFSKYGKVAHGWGTTPLMCVTMGLFAMFLCIILEIYNSSTLLNRISSN