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IVF0006581 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006581
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr12:7555757..7555927
RNA-Seq ExpressionIVF0006581
SyntenyIVF0006581
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038025.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.47e-2596.43Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTL GAST+QEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
KAA0041678.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]2.19e-26100Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.75e-2598.21Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.75e-2598.21Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
KAA0066358.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.20e-2596.43Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPED SPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
TrEMBL top hitse value%identityAlignment
A0A5A7TD15 Polyprotein2.1e-1996.43Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPED SPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
A0A5A7TFI6 Retrotransposable element Tf22.5e-20100Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
A0A5A7UVN1 Retrotransposable element Tf27.2e-2098.21Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
A0A5A7V6D1 Retrotransposable element Tf27.2e-2098.21Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
A0A5A7VIK9 Retrotransposable element Tf27.2e-2098.21Show/hide
Query:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
        MTRQEDEAFLLTKNAVMSTLAGAST+QEFNSVVNNVVVNLSDDNDDLPEDVSPASV
Subjt:  MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGACAAGAGGACGAAGCCTTCCTCCTCACCAAAAACGCAGTCATGTCAACCCTTGCCGGAGCAAGCACTCGACAGGAATTCAATTCTGTTGTCAATAACGTCGT
CGTGAACCTCTCAGATGATAACGATGATTTGCCAGAGGACGTTTCTCCAGCCTCCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGACAAGAGGACGAAGCCTTCCTCCTCACCAAAAACGCAGTCATGTCAACCCTTGCCGGAGCAAGCACTCGACAGGAATTCAATTCTGTTGTCAATAACGTCGT
CGTGAACCTCTCAGATGATAACGATGATTTGCCAGAGGACGTTTCTCCAGCCTCCGTTTAA
Protein sequenceShow/hide protein sequence
MTRQEDEAFLLTKNAVMSTLAGASTRQEFNSVVNNVVVNLSDDNDDLPEDVSPASV