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IVF0006608 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006608
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr11:6983951..6984378
RNA-Seq ExpressionIVF0006608
SyntenyIVF0006608
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]4.05e-4988.76Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MSTNRSIP EIVHKARTNLG+NISYQK WRAK+ MVKILH D VESY LIPRFFDKLVESN GTC ALEMDDSGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

KAA0052073.1 uncharacterized protein E6C27_scaffold578G00430 [Cucumis melo var. makuwa]4.81e-4884.27Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        +ST+RSIP+EIVHKARTNLGVNISYQK WRAK+ MVKILH D VE+Y LIPRFFDKLVESN GTC  LEMD+SGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

KAA0066303.1 uncharacterized protein E6C27_scaffold21G003560 [Cucumis melo var. makuwa]2.90e-58100Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]4.43e-5088.76Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MSTNRSIP EIVHKARTNLG+NISYQK WRAK+ MVKILH D VESY LIPRFFDKLVESN GTC ALEMDDSGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

TYK31656.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.81e-4886.52Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MST+R IPKEIVHKARTNLGVNISYQK WRAK+RMVKILH D VESY LIPRFFDKLVESN GTC ALEM DS HFKFCFMAFG SIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

TrEMBL top hitse value%identityAlignment
A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 45.5e-3888.76Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MSTNRSIP EIVHKARTNLG+NISYQK WRAK+ MVKILH D VESY LIPRFFDKLVESN GTC ALEMDDSGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

A0A5A7V7F3 Protein FAR1-RELATED SEQUENCE 41.3e-3686.52Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MST+ SIPKEIVHKARTNLGVNISYQK WRAK+ MVKILH D  ESY LIPRFFDKLVESN GTC ALEMDDSGHFKFCFM FGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

A0A5A7VDQ1 Uncharacterized protein1.1e-43100Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 45.5e-3888.76Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MSTNRSIP EIVHKARTNLG+NISYQK WRAK+ MVKILH D VESY LIPRFFDKLVESN GTC ALEMDDSGHFKFCFMAFGASIEG
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

A0A5D3C7L7 Uncharacterized protein1.8e-3686.52Show/hide
Query:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG
        MST+RSIPKEIVHKARTNLGV+ISYQK WRAK+ MVKILH D VESY LIPRFFDKLVESN GTC ALEMDD GHFKFCFMAFGASI+G
Subjt:  MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTAATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAACCTTGGAGGGCGAAAAAACGTATGGTAAA
GATATTACATGCTGACGCAGTTGAATCGTATGTATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCTAGGTACATGCAATGCTTTAGAAATGGATGATAGTG
GTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTAATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAACCTTGGAGGGCGAAAAAACGTATGGTAAA
GATATTACATGCTGACGCAGTTGAATCGTATGTATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCTAGGTACATGCAATGCTTTAGAAATGGATGATAGTG
GTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGA
Protein sequenceShow/hide protein sequence
MSTNRSIPKEIVHKARTNLGVNISYQKPWRAKKRMVKILHADAVESYVLIPRFFDKLVESNLGTCNALEMDDSGHFKFCFMAFGASIEG