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IVF0006622 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006622
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:20974924..20975088
RNA-Seq ExpressionIVF0006622
SyntenyIVF0006622
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.08e-1482.5Show/hide
Query:  MVEGENGNDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNN
        M+EGENGNDRSGGGGR RR+WWKA TAE+DRLVEGEN N+
Subjt:  MVEGENGNDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNN

KAA0063959.1 gag/pol protein [Cucumis melo var. makuwa]1.76e-0443.4Show/hide
Query:  NDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNNDG---------WWRERTAEV
        +D SGG       WW+ K A +DR+VEGENG++ G         WWRE+TA +
Subjt:  NDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNNDG---------WWRERTAEV

KAA0066345.1 hypothetical protein E6C27_scaffold21G004100 [Cucumis melo var. makuwa]1.18e-0447.5Show/hide
Query:  WWKAKTAEVDRLVEGENGNNDG---------WWRERTAEV
        WW+ KTA +D+LVE ENGN+ G         WWRE+T  +
Subjt:  WWKAKTAEVDRLVEGENGNNDG---------WWRERTAEV

TrEMBL top hitse value%identityAlignment
A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein1.7e-1082.5Show/hide
Query:  MVEGENGNDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNN
        M+EGENGNDRSGGGGR RR+WWKA TAE+DRLVEGEN N+
Subjt:  MVEGENGNDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGGAGAAAACGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACAATGGTGGAAGGCAAAAACGGCTGAGGTCGATCGGTTGGTGGAGGGAGAAAA
CGGCAACAATGATGGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGGAGAAAACGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACAATGGTGGAAGGCAAAAACGGCTGAGGTCGATCGGTTGGTGGAGGGAGAAAA
CGGCAACAATGATGGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA
Protein sequenceShow/hide protein sequence
MVEGENGNDRSGGGGRKRRQWWKAKTAEVDRLVEGENGNNDGWWRERTAEVGRL