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IVF0006670 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006670
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr11:16825506..16825676
RNA-Seq ExpressionIVF0006670
SyntenyIVF0006670
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032569.1 uncharacterized protein E6C27_scaffold43053G00290 [Cucumis melo var. makuwa]4.82e-2379.63Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDM
        MA+MK+QVNLT+R VGNQ  NQ YS+SSK KIPEPK FNGNRDAKELE+FIFDM
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDM
KAA0032968.1 uncharacterized protein E6C27_scaffold269G00500 [Cucumis melo var. makuwa]6.95e-2075.47Show/hide
Query:  KMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDME
        +MKMQVNLT++ +  QTPNQ YS+SSK KIPEPK FNGN DAKELENFIF ME
Subjt:  KMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDME
KAA0048463.1 uncharacterized protein E6C27_scaffold61G00640 [Cucumis melo var. makuwa]2.17e-2276.79Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
        MA+MK+ VNL +R VGNQT NQV+S+SSK KIP+PK FNGNRD KELENFIFDMEQ
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
KAA0067610.1 uncharacterized protein E6C27_scaffold485G00780 [Cucumis melo var. makuwa]1.85e-2280.36Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
        MAKMKMQVNLT+R  GNQT N V S+SSKLKIPEPK FNGNRD KELE FIFDM+Q
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
TYK02288.1 uncharacterized protein E5676_scaffold18G00960 [Cucumis melo var. makuwa]7.28e-2280Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDME
        MA MKMQVNLT+R VGNQTPNQV +ISS++KIP+PK FN NRDAKEL+NFIFDME
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDME
TrEMBL top hitse value%identityAlignment
A0A5A7STQ2 Uncharacterized protein1.8e-1579.63Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDM
        MA+MK+QVNLT+R VGNQ  NQ YS+SSK KIPEPK FNGNRDAKELE+FIFDM
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDM
A0A5A7VKA0 Uncharacterized protein2.4e-1580.36Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
        MAKMKMQVNLT+R  GNQT N V S+SSKLKIPEPK FNGNRD KELE FIFDM+Q
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
A0A5D3BTI7 Uncharacterized protein1.8e-1580Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDME
        MA MKMQVNLT+R VGNQTPNQV +ISS++KIP+PK FN NRDAKEL+NFIFDME
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDME
A0A5D3DYE0 Uncharacterized protein3.1e-1576.79Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
        MA+MK+ VNL +R VGNQT NQV+S+SSK KIP+PK FNGNRD KELENFIFDMEQ
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
A0A5D3E481 Reverse transcriptase1.0e-1375Show/hide
Query:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
        M +MKMQVNLT++ VGNQTPNQVY++SS+LKI E K FN N DAKELEN IFDMEQ
Subjt:  MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGATGAAAATGCAAGTAAATTTAACAATAAGAACAGTGGGGAACCAAACTCCAAATCAAGTATATAGTATTTCGAGCAAGCTCAAGATCCCGGAACCCAAAAC
CTTCAATGGGAACCGTGATGCTAAAGAGCTTGAAAATTTCATCTTCGATATGGAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGATGAAAATGCAAGTAAATTTAACAATAAGAACAGTGGGGAACCAAACTCCAAATCAAGTATATAGTATTTCGAGCAAGCTCAAGATCCCGGAACCCAAAAC
CTTCAATGGGAACCGTGATGCTAAAGAGCTTGAAAATTTCATCTTCGATATGGAGCAGTAA
Protein sequenceShow/hide protein sequence
MAKMKMQVNLTIRTVGNQTPNQVYSISSKLKIPEPKTFNGNRDAKELENFIFDMEQ