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IVF0006699 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006699
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:14797713..14797880
RNA-Seq ExpressionIVF0006699
SyntenyIVF0006699
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]6.48e-3096.36Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC DVDDEDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]1.59e-3096.36Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+D+DDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]1.79e-2992.73Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC++VDD+DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN 
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.31e-2994.55Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC DVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK11987.1 retrotransposon protein [Cucumis melo var. makuwa]1.12e-3098.18Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWR+DLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TrEMBL top hitse value%identityAlignment
A0A5A7SZH3 Retrotransposon protein5.8e-2296.36Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC DVDDED+GDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7UG16 Retrotransposon protein5.8e-2296.36Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7UZF0 Retrotransposon protein7.5e-2296.36Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC DVDDEDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7V4Q8 Retrotransposon protein2.6e-2296.36Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+D+DDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5D3CJ50 Retrotransposon protein2.0e-2298.18Show/hide
Query:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWR+DLAESMFTEWQLRNA
Subjt:  MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGTAACGACGTTGACGACGAGGACGAAGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAATACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAATTGCGTAACGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGTAACGACGTTGACGACGAGGACGAAGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAATACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAATTGCGTAACGCTTAA
Protein sequenceShow/hide protein sequence
MTYCNDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA