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IVF0006720 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006720
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA glycosylase superfamily protein
Genome locationchr01:30984996..30990131
RNA-Seq ExpressionIVF0006720
SyntenyIVF0006720
Gene Ontology termsGO:0006284 - base-excision repair (biological process)
GO:0008725 - DNA-3-methyladenine glycosylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025712.1 guaA [Cucurbita argyrosperma subsp. argyrosperma]6.73e-4284.85Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRK GVKPLKKLEKP QE ESKDKRVPLSPPQC           DRHQAIL LSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS

XP_004136097.2 uncharacterized protein LOC101205558 [Cucumis sativus]4.02e-4589.8Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC          DRHQAILNLSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS

XP_008461179.1 PREDICTED: probable GMP synthase [glutamine-hydrolyzing] [Cucumis melo]3.92e-4589.8Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC          DRHQAILNLSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS

XP_023004117.1 uncharacterized protein LOC111497544 [Cucurbita maxima]1.39e-4184.85Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRK GVKPLKKLEKP QE ESKDKRVPLSPPQC           DRHQAIL LSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS

XP_038900164.1 probable GMP synthase [glutamine-hydrolyzing] [Benincasa hispida]2.32e-4474.4Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDSIL
        MSGPPRIRSMNVADSDSRPVLGPTGNKAR VETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC          DRHQAILNLSMNASCSSDASSDS  
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDSIL

Query:  LYLGYNRGEGGR-PIIERNMHVLYK
              RG   R P + R  +   K
Subjt:  LYLGYNRGEGGR-PIIERNMHVLYK

TrEMBL top hitse value%identityAlignment
A0A0A0K8L6 Uncharacterized protein1.1e-3689.8Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC          DRHQAILNLSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS

A0A1S3CE52 probable GMP synthase [glutamine-hydrolyzing]1.1e-3689.8Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC          DRHQAILNLSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS

A0A5A7UYZ9 Putative GMP synthase1.1e-3689.8Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC          DRHQAILNLSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC----------DRHQAILNLSMNASCSSDASSDS

A0A6J1H7A2 uncharacterized protein LOC1114610816.6e-3484.85Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRK GVKPLKKLEKP QE ESKDKRVPLSPPQC           DRHQAIL LSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS

A0A6J1KPI7 uncharacterized protein LOC1114975446.6e-3484.85Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS
        MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRK GVKPLKKLEKP QE ESKDKRVPLSPPQC           DRHQAIL LSMNASCSSDASSDS
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQC-----------DRHQAILNLSMNASCSSDASSDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15970.1 DNA glycosylase superfamily protein7.5e-0646.08Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQE---VESKDKR-----VPLSP----PQCDR-HQAIL---NLSMNASCSSDA
        MS PPR RS+N  + + R VLGPTGNK +    RKP   P  KLEKP  E   ++SKD++      P SP     QC     +IL   + SM AS SSDA
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQE---VESKDKR-----VPLSP----PQCDR-HQAIL---NLSMNASCSSDA

Query:  SS
        SS
Subjt:  SS

AT1G80850.1 DNA glycosylase superfamily protein4.2e-0937.96Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQCDRHQAILNLSMNASCSSDASSDSILLYLGYNRGEG
        MS PPR+RS++ +D + R VLGP GNK +     KP  KP+ +  K     E   +  PLSPP   R+     +SM AS SSDASS      L       
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQCDRHQAILNLSMNASCSSDASSDSILLYLGYNRGEG

Query:  GRPIIERN
        G+ ++ R+
Subjt:  GRPIIERN

AT5G57970.1 DNA glycosylase superfamily protein1.0e-0738.21Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEK----------------PRQEVESKDKRVPLSPPQ-CDRHQAIL--NLSMNASCS
        MSG PR++SMNVA++++R  LG T  KA    T K   K L+KLE+                P + V S  ++  L+      RH+  L  NLS+NAS S
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEK----------------PRQEVESKDKRVPLSPPQ-CDRHQAIL--NLSMNASCS

Query:  SDASSDSILLYLGYNRGEGGRPI
        SDAS DS      ++R   GR I
Subjt:  SDASSDSILLYLGYNRGEGGRPI

AT5G57970.2 DNA glycosylase superfamily protein1.0e-0738.21Show/hide
Query:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEK----------------PRQEVESKDKRVPLSPPQ-CDRHQAIL--NLSMNASCS
        MSG PR++SMNVA++++R  LG T  KA    T K   K L+KLE+                P + V S  ++  L+      RH+  L  NLS+NAS S
Subjt:  MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEK----------------PRQEVESKDKRVPLSPPQ-CDRHQAIL--NLSMNASCS

Query:  SDASSDSILLYLGYNRGEGGRPI
        SDAS DS      ++R   GR I
Subjt:  SDASSDSILLYLGYNRGEGGRPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCCCTCCGAGAATCCGGTCTATGAATGTGGCGGATTCCGATTCACGACCGGTACTTGGGCCTACTGGGAACAAAGCGCGAACTGTAGAGACTAGAAAACCTGG
TGTGAAGCCATTGAAGAAGCTTGAGAAGCCTCGTCAAGAAGTTGAATCAAAGGACAAAAGGGTGCCATTGTCTCCGCCTCAATGCGATCGCCACCAGGCGATTCTCAATC
TGTCAATGAATGCCTCGTGTTCTTCGGATGCGTCGTCTGATTCGATATTATTATATTTAGGGTACAATAGGGGGGAGGGGGGGAGGCCCATTATTGAAAGAAACATGCAT
GTGCTTTATAAATTGTTACATCTTCCATTCATCACCACCACTTGTCTTGTTGAACTTAAAAGGAAGGGAAGAAATAAATGGGGAGAGGGTGTGGCTCCAAAGAATATAAT
AAGCATATGCAGAATGAATAATATAACTAAAGAGCTAAAGGGTTTTTCGGGGGTCTCGACACGGATCTGTTCTCGATTTCTTTTTTCTTTTTCTTTTTTTTTTGGGGTAC
TATGGAAAGGGAGAAAAGGGATGTTATATGAATATGCAGCTGAGAAAATTGGTTTTGTTAATTACAGTTACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCCCTCCGAGAATCCGGTCTATGAATGTGGCGGATTCCGATTCACGACCGGTACTTGGGCCTACTGGGAACAAAGCGCGAACTGTAGAGACTAGAAAACCTGG
TGTGAAGCCATTGAAGAAGCTTGAGAAGCCTCGTCAAGAAGTTGAATCAAAGGACAAAAGGGTGCCATTGTCTCCGCCTCAATGCGATCGCCACCAGGCGATTCTCAATC
TGTCAATGAATGCCTCGTGTTCTTCGGATGCGTCGTCTGATTCGATATTATTATATTTAGGGTACAATAGGGGGGAGGGGGGGAGGCCCATTATTGAAAGAAACATGCAT
GTGCTTTATAAATTGTTACATCTTCCATTCATCACCACCACTTGTCTTGTTGAACTTAAAAGGAAGGGAAGAAATAAATGGGGAGAGGGTGTGGCTCCAAAGAATATAAT
AAGCATATGCAGAATGAATAATATAACTAAAGAGCTAAAGGGTTTTTCGGGGGTCTCGACACGGATCTGTTCTCGATTTCTTTTTTCTTTTTCTTTTTTTTTTGGGGTAC
TATGGAAAGGGAGAAAAGGGATGTTATATGAATATGCAGCTGAGAAAATTGGTTTTGTTAATTACAGTTACAAGTAA
Protein sequenceShow/hide protein sequence
MSGPPRIRSMNVADSDSRPVLGPTGNKARTVETRKPGVKPLKKLEKPRQEVESKDKRVPLSPPQCDRHQAILNLSMNASCSSDASSDSILLYLGYNRGEGGRPIIERNMH
VLYKLLHLPFITTTCLVELKRKGRNKWGEGVAPKNIISICRMNNITKELKGFSGVSTRICSRFLFSFSFFFGVLWKGRKGMLYEYAAEKIGFVNYSYK