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IVF0006756 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006756
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr04:2277187..2277645
RNA-Seq ExpressionIVF0006756
SyntenyIVF0006756
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591653.1 hypothetical protein SDJN03_13999, partial [Cucurbita argyrosperma subsp. sororia]6.02e-5182.35Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC S NEQESKRL GWQILW+K KKEKR++FSCSSVEL SSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

KGN60340.2 hypothetical protein Csa_000895 [Cucumis sativus]5.04e-5799.01Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
        MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVEL SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL

Query:  D
        D
Subjt:  D

ONI33933.1 hypothetical protein PRUPE_1G454200 [Prunus persica]3.94e-2255.24Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKM-FSCSSVE-LCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL
        MG+K W NSRSQS+RLGQ  + SN  +  R GWQ  W+K K +K+K  FS S+V    +SY+P  Y  NFD      EPDNLSRSFSARFADPS++  N 
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKM-FSCSSVE-LCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL

Query:  R-LLD
        R LLD
Subjt:  R-LLD

XP_022936244.1 uncharacterized protein LOC111442916 [Cucurbita moschata]5.15e-5283.33Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC SSNEQESKRL GWQILW+K KKEKR++FSCSSVEL SSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

XP_023536137.1 uncharacterized protein LOC111797385 [Cucurbita pepo subsp. pepo]5.15e-5283.33Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC SSNEQESKRL GWQILW+K KKEKR++FSCSSVEL SSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

TrEMBL top hitse value%identityAlignment
A0A0A0LJH9 Uncharacterized protein1.7e-4899.01Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
        MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVEL SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL

Query:  D
        D
Subjt:  D

A0A251RD41 Uncharacterized protein3.0e-1655.24Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSV-ELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL
        MG+K W NSRSQS+RLGQ  + SN  +  R GWQ  W+K K + K+K FS S+V    +SY+P  Y  NFD      EPDNLSRSFSARFADPS++  N 
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSV-ELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL

Query:  R-LLD
        R LLD
Subjt:  R-LLD

A0A5N5I1S5 Pentatricopeptide repeat-containing protein1.6e-1448.57Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSV--ELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN
        MG++ WRNSRSQSIRLG +    +     + GWQ  W++ K E++K+F  S+V  +  +SY+P+ Y  NFD+     EPDNL RSFSARFADPS ++  N
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSV--ELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN

Query:  LRLLD
          LLD
Subjt:  LRLLD

A0A6J1F7R9 uncharacterized protein LOC1114429165.6e-3983.33Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC SSNEQESKRL GWQILW+K KKEKR++FSCSSVEL SSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

A0A6J5TRF8 Uncharacterized protein5.1e-1655.24Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSV-ELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN
        MG+K W NSRSQSIRLGQ  +SSN  +  + GWQ  W+K K + K+K FS S+V    +SY+P  Y  NFD      EPDNLSR FSARFADPS I+ +N
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSV-ELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN

Query:  LRLLD
          LLD
Subjt:  LRLLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein1.1e-0536.36Show/hide
Query:  NSRSQSIRLGQSCVSSNEQESKRLGWQIL--WRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDE-ENW--DSEPDNLSRSFSARFADPSIVSRNLRLL
        +S  ++I LG+   S  EQ+  +   ++L  W+ L  + + + S +S     +Y P  Y LNFD+   W    EP+NLSRSFS RFADP+ +     LL
Subjt:  NSRSQSIRLGQSCVSSNEQESKRLGWQIL--WRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDE-ENW--DSEPDNLSRSFSARFADPSIVSRNLRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGAAATGGCGAAATTCACGTAGTCAAAGCATCAGATTGGGACAGAGCTGTGTTTCTTCAAATGAACAAGAAAGCAAAAGATTGGGATGGCAAATTTTGTGGAG
AAAATTGAAGAAGGAGAAGAGAAAAATGTTCAGTTGTTCTTCCGTTGAATTGTGTTCTTCTTATAATCCAAATGCTTATCACTTAAATTTTGATGAAGAAAATTGGGACT
CTGAGCCTGATAATCTTTCCAGATCGTTCTCTGCTCGTTTTGCTGATCCTTCAATTGTTTCAAGAAACTTGAGATTGTTGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATATGATCTCCATTTTCCTCTCAACTTTTCTACCCTAATTTCATTGACCCTTTTGATTTCTGGTTCTATCTTTCATCTTTGAAGCTTCAATTTTGAAGAAAGAAAAATGG
GAATGAAATGGCGAAATTCACGTAGTCAAAGCATCAGATTGGGACAGAGCTGTGTTTCTTCAAATGAACAAGAAAGCAAAAGATTGGGATGGCAAATTTTGTGGAGAAAA
TTGAAGAAGGAGAAGAGAAAAATGTTCAGTTGTTCTTCCGTTGAATTGTGTTCTTCTTATAATCCAAATGCTTATCACTTAAATTTTGATGAAGAAAATTGGGACTCTGA
GCCTGATAATCTTTCCAGATCGTTCTCTGCTCGTTTTGCTGATCCTTCAATTGTTTCAAGAAACTTGAGATTGTTGGATTGAAATTTATTAGTAATAATCTTATGGGTTT
TGTGTAATTTTTGTAACCC
Protein sequenceShow/hide protein sequence
MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELCSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLLD