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IVF0006778 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006778
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationchr11:11563739..11566575
RNA-Seq ExpressionIVF0006778
SyntenyIVF0006778
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053240.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]9.54e-56100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

XP_011649975.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]5.14e-5493.75Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAC DDL
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

XP_016901843.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]1.41e-60100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

XP_016901844.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]1.08e-55100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

XP_016901880.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]3.76e-5696.84Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKP SH TFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAC DD
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD

TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein4.8e-4093.75Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKP SH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAC DDL
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

A0A1S4E0U2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X15.0e-45100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

A0A1S4E0U8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X23.3e-41100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

A0A1S4E1L9 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.1e-4196.84Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKP SH TFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAC DD
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD

A0A5A7UDF2 Protein NUCLEAR FUSION DEFECTIVE 63.3e-41100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.2e-0842.55Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        GARS  R  + S+R AAA  G     + ++P  FR    +       R    +SFC+ES++P+HS ++SALMTS LSIS  + GWL +AC DD+
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

Arabidopsis top hitse value%identityAlignment
AT1G28395.2 unknown protein5.7e-0940.7Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL
        ARS FRS +  A   A    + PKP   S+ + FRM    P ++  FR    +S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWL

AT1G28395.4 unknown protein4.6e-1140.43Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        ARS FRS +  A   A    + PKP   S+ + FRM    P ++  FR    +S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ + C DD+
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

AT2G20585.1 nuclear fusion defective 68.8e-1042.55Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL
        GARS  R  + S+R AAA  G     + ++P  FR    +       R    +SFC+ES++P+HS ++SALMTS LSIS  + GWL +AC DD+
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL

AT2G20585.2 nuclear fusion defective 63.3e-0941.94Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD
        GARS  R  + S+R AAA  G     + ++P  FR    +       R    +SFC+ES++P+HS ++SALMTS LSIS  + GWL +AC +D
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD

AT2G33847.1 unknown protein3.0e-1045.05Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPKPSST-SPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD
        ARS FRS  G A  AA    ++P PSS  S F++    P SH  FR    +S C+E+M+P+H+ ++SAL+ SMLS+S  S  W  + CIDD
Subjt:  ARSAFRSFSGSARRAAAHIGSQPKPSST-SPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCCCCCTTTCG
CATGGCAACTAACAAACCCTTCTCTCATTGTACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGCATGCATTGACGATCTATGA
mRNA sequenceShow/hide mRNA sequence
TCCCCCTTTTCAAAGGATATTTCGAAAATACCCAAAGTAGGGTTTTAGCGTTAGACCTCAGCAGCCAGCCAAGAAGCAAGAGTCGGTTCTCTCTTGTTCATTTCATTTTC
CGAAACCAAGAAGATCAACCTTCAGAATCTATCATTTCTTCTCATAATCAATGGCTTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCT
GCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCCCCCTTTCGCATGGCAACTAACAAACCCTTCTCTCATTGTACTTTCAGGTGTGCGCCTGTGATGAGCTT
CTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGCATGCATTG
ACGATCTATGATAAATGACACAAGAGGATCTAGTCGGACAGTGACTTCTATTAAGTAGAAGCTTCCATGCTCCAAATGGTGGTTTGTGAAGAAGACCTTCCGATCAATGG
CAATGGATTATTGTTATTTGAAGACTGATTTAGTTTTAATTTTTAGTGTTGATTCTCTATTTCATACTCGTTGATTGTTAACAGTTGTATCTGATCATGTTAATTTTTTC
ATTGAATATTCATCGAGCAATTGACAACTTCATCTCCTTAGAAAAATTGGGTTTGTATTTTGTAGCAACTTCGACATAAGTGACTGAAATATGTTCTAGTGATGCGTGGT
CAAATATGAGTGTCTTGAATCTTGGTTAAAAATATCAAAGTGAAGATTTTG
Protein sequenceShow/hide protein sequence
MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL