CuGenDBv2

Gene ID	IVF0006779
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rab5-interacting
Genome location	chr11:19114099..19117173
RNA-Seq Expression	IVF0006779
Synteny	IVF0006779
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004143124.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

3.93e-87

99.22

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

2.77e-87

100

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_022947918.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]

7.63e-85

96.9

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_022986965.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

5.37e-85

96.12

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

3.23e-86

98.45

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKE+KPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

1.8e-66

99.22

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

1.4e-66

100

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A5D3DK85 Rab5-interacting

1.4e-66

100

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X2

9.9e-65

96.9

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1JFH8 uncharacterized protein C20orf24 homolog

7.6e-65

96.12

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Query:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.8e-15

38.74

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Query:  NGHLAPFKLAKLIDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K++  +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLIDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAH
        +     ++  H
Subjt:  LAWILVYSLAH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.8e-18

40.18

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Query:  NGHLAPFKLAKLIDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K++  +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLIDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAHF
        + WI+ Y+  H+
Subjt:  LAWILVYSLAHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.7e-48

69.17

Show/hide

Query:  MKEAKPVKFNLHQHQD----HQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEE
        MKE K  K +  Q Q     HQN HL  F  AKL D EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW L+FLAIS+ +VYGYYA++LK+DEE
Subjt:  MKEAKPVKFNLHQHQD----HQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF
        +FGGH ALLQ+GLFAS++LFLLAWILVYSL+ F
Subjt:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF

AT5G59410.1 Rab5-interacting family protein

2.4e-55

78.46

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Query:  MKEAKPVKFN-LHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFG
        MKE+K  K N L Q ++HQN HL+P KLAKL DP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ++FLAIS+ +VYGYYAMILKVDEE+FG
Subjt:  MKEAKPVKFN-LHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLLAWILVYSLAHF
        GH ALLQEGLFAS+TLFLLAWILVYSLAHF
Subjt:  GHGALLQEGLFASITLFLLAWILVYSLAHF

Sequences

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CDS sequence

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ATGAAAGAAGCAAAACCGGTTAAGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAATTAATCGATCCAGAAGCCTCCTG
GGACAAGGATCAACTGGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGTTCCATACCTTTGGTTGGAGGCATTTGGTTTCTAA
TTTTTTTGGCGATATCAACCAGTGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTTCAAGAGGGCCTTTTT
GCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGTTTGGCACACTTTTGA

mRNA sequence

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GTGGGCTCGCTAATAAACTAGAACTTTTAGTAAAGGGCCAGCCTGCATGAGAATTGGGATATTTTAACACAGTCTATTTAATGGGCCGGCCCAGATTCAAGTGGCCGACG
TCCTGCCGGCATCTTCTACACTTGCTCCAGAGTCCAACCCCAGAACAGAAGAAACCAGCCGAGAGACGACGATAGATTCTTTCTTTGCAGTGATTTGACCCCTGATGCAT
CCTCCAAATCCAAGTTTCTTCTTCATTGATCCAACCGTTTTTCTCTGTCTTCTTCCCTGAAATACAGTGTTTCCATTGGGACTGTAGCATTTTATCTGCACTTTTTTTTC
TTTCCGGAATCTAGATCTAAGCTTACTGTAGATTCTTTGGTTGTTTTTGTTCGCTTTTCGCGAAGAGTGATTGATTGAATTATCCGGTATGAAAGAAGCAAAACCGGTTA
AGTTCAATCTTCATCAGCATCAAGATCATCAGAATGGTCATTTGGCTCCATTCAAGCTCGCTAAATTAATCGATCCAGAAGCCTCCTGGGACAAGGATCAACTGGGAGAT
GTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGTTCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTTTTGGCGATATCAACCAG
TGTTGTATATGGATACTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTTCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGC
TTGCTTGGATTCTCGTATACAGTTTGGCACACTTTTGATTGGCGAAGAATGATCTGACATCCTGAAAATTACTTGGACGAGGAGGGAAAGAAAGGCTGCTAACTGCCAGA
ACACAACATTGTGACTACTTAATCGAGACCAAGGAGTTGGAAGGTTCGAATCATTAATATGTTTTTATAATTAACTTTTATTGGTTGAAGCGTCTATAATGGGATTCTGG
AGAATATTACTGGGG

Protein sequence

Show/hide protein sequence

MKEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLLAWILVYSLAHF

IVF0006779 (gene) of Melon (IVF77) v1 genome