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IVF0006782 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006782
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr10:25894385..25894905
RNA-Seq ExpressionIVF0006782
SyntenyIVF0006782
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025991.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]3.14e-0756.52Show/hide
Query:  ARLGLKA--LGSARLGSTSAR-LGLVSARLGLWLGSAWPRLGSTRL----TRLGSRLTRLAARLGSAGGSAHSARLAAHSARLGQPAWSRVG
        ARLGL +  LGSAR  + SAR      +RLG  LGS   RLGS RL    TRL +RLTRLAARLGSA GSA   R +AHSAR      SR+G
Subjt:  ARLGLKA--LGSARLGSTSAR-LGLVSARLGLWLGSAWPRLGSTRL----TRLGSRLTRLAARLGSAGGSAHSARLAAHSARLGQPAWSRVG

KAA0032698.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.14e-0476.47Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK
        +SVDLP+ERKLSPTRP A PEN SV S LPS+EK
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK

KAA0054224.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]6.19e-11100Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK
        MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK

KAA0057143.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.46e-1244.17Show/hide
Query:  VDLPKERKLSPTRPTARPENPSVKSELPSKEKR--------------------------------------ARLGLKALGSARLGSTSARLGLVSARLGL
        +  P++ KL P +PTARPEN SV S LPS+EK                                        RLGLKA GSARLGSTSARLGL SA +  
Subjt:  VDLPKERKLSPTRPTARPENPSVKSELPSKEKR--------------------------------------ARLGLKALGSARLGSTSARLGLVSARLGL

Query:  WLGSAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSARLA--AHSARLGQPAW---SRVGLD
          GSA  +LGS    +LGS  T LAARL +A GSAHSAR A      RLG   +   SR+GL+
Subjt:  WLGSAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSARLA--AHSARLGQPAW---SRVGLD

KAA0068117.1 retrotransposon protein [Cucumis melo var. makuwa]5.43e-0996.97Show/hide
Query:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEK
        SVDLPKERKLSPTRPTARPENPSVKSELPS+EK
Subjt:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEK

TrEMBL top hitse value%identityAlignment
A0A5A7SP62 CCR4-NOT transcription complex subunit 12.1e-0657.3Show/hide
Query:  ARLGL---KALGSARLGSTSARLGLVSARLGLWLGSAWPRLGSTRL-TRLGSRLTRLAARLGSAGGSAHSARLAAHSARLGQPAWSRVG
        ARLG     A GSA     SAR G     LG  LGS   RLG  RL  RL +RLTRLAARLGSA GSAHSAR +AHSAR      SR+G
Subjt:  ARLGL---KALGSARLGSTSARLGLVSARLGLWLGSAWPRLGSTRL-TRLGSRLTRLAARLGSAGGSAHSARLAAHSARLGQPAWSRVG

A0A5A7UGC7 NBS-LRR type resistance protein4.9e-08100Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK
        MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEK

A0A5A7UMJ9 NBS-LRR type resistance protein1.5e-0944.38Show/hide
Query:  PKERKLSPTRPTARPENPSVKSELPSKEKR--------------------------------------ARLGLKALGSARLGSTSARLGLVSARLGLWLG
        P++ KL P +PTARPEN SV S LPS+EK                                        RLGLKA GSARLGSTSARLGL SA +    G
Subjt:  PKERKLSPTRPTARPENPSVKSELPSKEKR--------------------------------------ARLGLKALGSARLGSTSARLGLVSARLGLWLG

Query:  SAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSARLA-----AHSARLGQPAWSRVGLD
        SA  +LGS    +LGS  T LAARL +A GSAHSAR A          LG    SR+GL+
Subjt:  SAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSARLA-----AHSARLGQPAWSRVGLD

A0A5A7VLK0 Retrotransposon protein5.4e-0796.97Show/hide
Query:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEK
        SVDLPKERKLSPTRPTARPENPSVKSELPS+EK
Subjt:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGAGCTCG
GCTCGGCTTGAAGGCGCTCGGCTCGGCTCGGCTCGGCTCCACCTCGGCTCGGCTCGGCTTGGTCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCG
GCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTGGTTCGGCTGGCGGCTCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGG
CTTGGACAGCCGGCTTGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGAGCTCG
GCTCGGCTTGAAGGCGCTCGGCTCGGCTCGGCTCGGCTCCACCTCGGCTCGGCTCGGCTTGGTCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCG
GCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTGGTTCGGCTGGCGGCTCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGG
CTTGGACAGCCGGCTTGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG
Protein sequenceShow/hide protein sequence
MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKRARLGLKALGSARLGSTSARLGLVSARLGLWLGSAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSARLAAHSAR
LGQPAWSRVGLDERKW