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IVF0006795 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006795
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGamma-secretase subunit PEN-2
Genome locationchr11:454887..458727
RNA-Seq ExpressionIVF0006795
SyntenyIVF0006795
Gene Ontology termsGO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040759.1 putative gamma-secretase subunit PEN-2 [Cucumis melo var. makuwa]3.07e-95100Show/hide
Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_008460893.1 PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo]1.66e-8781.99Show/hide
Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------

Query:  ---------IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  ---------IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_011649406.1 probable gamma-secretase subunit PEN-2 [Cucumis sativus]9.52e-9095.49Show/hide
Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA
        MET  NPNANTNSNPNTI+SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MAIISSWA
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]2.28e-8287.59Show/hide
Query:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAII
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF V MAII
Subjt:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAII

Query:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_038900346.1 probable gamma-secretase subunit PEN-2 [Benincasa hispida]2.09e-8488.49Show/hide
Query:  METSHNPNANTNSNPNT------ITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMA
        ME+S NPN NTNSNPN       ++SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MA
Subjt:  METSHNPNANTNSNPNT------ITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMA

Query:  IISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        IISSWALTFSIGGERLFG VWDKLVMYNLAD+LGLTGWS
Subjt:  IISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

TrEMBL top hitse value%identityAlignment
A0A0A0LK38 Uncharacterized protein1.7e-6795.49Show/hide
Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA
        MET  NPNANTNSNPNTI+SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MAIISSWA
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A1S3CDI1 probable gamma-secretase subunit PEN-24.2e-6681.99Show/hide
Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------

Query:  ---------IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  ---------IVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A5A7THJ9 Putative gamma-secretase subunit PEN-21.1e-71100Show/hide
Query:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA
        METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA
Subjt:  METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-22.4e-6186.86Show/hide
Query:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAII
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGF V MAII
Subjt:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAII

Query:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-26.2e-6287.59Show/hide
Query:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAII
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF V MAII
Subjt:  METSHNPNANTNSNP----NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAII

Query:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

SwissProt top hitse value%identityAlignment
Q5G235 Gamma-secretase subunit PEN-21.1e-0735.48Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF + + ++S+W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY

Q6QI68 Gamma-secretase subunit PEN-25.5e-0734.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF   + ++++W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY

Q9CQR7 Gamma-secretase subunit PEN-24.2e-0735.48Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF   + I+++W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY

Q9FY84 Probable gamma-secretase subunit PEN-25.4e-4772.31Show/hide
Query:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWAL
        + NPN N N NP +TI S   V WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V SAIGF V  A++S+WAL
Subjt:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWAL

Query:  TFSIGGERLFGPVWDKLVMYNLADKLGLTG
        TFSIGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  TFSIGGERLFGPVWDKLVMYNLADKLGLTG

Q9NZ42 Gamma-secretase subunit PEN-22.5e-0735.48Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF   + +++SW   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMY

Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).3.9e-4872.31Show/hide
Query:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWAL
        + NPN N N NP +TI S   V WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V SAIGF V  A++S+WAL
Subjt:  SHNPNANTNSNP-NTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVSMAIISSWAL

Query:  TFSIGGERLFGPVWDKLVMYNLADKLGLTG
        TFSIGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  TFSIGGERLFGPVWDKLVMYNLADKLGLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGA
GGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCT
CGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTG
TTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAGGGAGAAGGAACAGTTTAGCTTTAAGGATTCTGTTTCTCAAAGTCATTCGAACTCCTCTTGCAATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAA
TCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTG
GATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATC
GGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGC
TGACAAATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCTCTTCGGCAACCAACTTCAACCTTCTTGTATATATCAAAATCTGTAACTCTCTACTGTCATTGTTTT
CTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGTTCCAATTGTCGAACATGAACCTTTGCATTACCCATGTTGATTCTTGTTAATAGTTGATTCACAA
GTTTGAATCGGGTCTCCCTTCAACGGCGGACTAAGATTTGTGGATAAAATTCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATA
AGCCGTGCTCTTTTCTGGTTCCCCTACATCAAAACATCCATTTTGAAGGTTGAAAACATCTTGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAAGGGACAGTGTACAGT
GATCAACAATCCCCAAAAGAAAGGTATGATTGTATACTGTTACACTTCTTGTTATGGATATATTAGGATAACTAGTATGGTTGGTAAAAGGGTATTTTAGTAAATAGTTA
GGTTTTTTTTATAGAACTTTTAGTTGTAAACAAGAGGGAGTGTGGTTGAGAGAATTTTTTTGTGGGATTTTCTTTCCAGAGGGCTATTAGGGAGAGAGTAGCTCTCTTGA
AAGGCTAGATTATCTTGTTACTTTTCCTACTTTTCCTATTGATATTATAACAAATTTTCATATATTTCTATGATAGTGTTCTTTGTTG
Protein sequenceShow/hide protein sequence
METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVSMAIISSWALTFSIGGERL
FGPVWDKLVMYNLADKLGLTGWS