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IVF0006819 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006819
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionextensin-like
Genome locationchr03:5154082..5154672
RNA-Seq ExpressionIVF0006819
SyntenyIVF0006819
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]2.24e-139100Show/hide
Query:  MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSP
        MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSP
Subjt:  MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSP

Query:  APTSLRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN
        APTSLRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN
Subjt:  APTSLRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN

KAE8647157.1 hypothetical protein Csa_018820, partial [Cucumis sativus]8.13e-2247.79Show/hide
Query:  FPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVV--KYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSPAPT
        +P  EG K +LQIS +S+ IKKPPL      PV+  KYE++P+IINV+T  DF YIVQLLTGDPN PPP+YPCNC     + +P      P     P   
Subjt:  FPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVV--KYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSPAPT

Query:  SLRPLVSPGDFTP
         L  L++P    P
Subjt:  SLRPLVSPGDFTP

KAG6602166.1 hypothetical protein SDJN03_07399, partial [Cucurbita argyrosperma subsp. sororia]3.22e-1642.61Show/hide
Query:  SSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPP---VVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGIL
        SS  +PP +  +  LQIS  SR+I KPPLP   A P   ++KY+++P+II+V+TP +FKYIVQLLTG PN PPP                  D     +L
Subjt:  SSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPP---VVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGIL

Query:  SPAPTSLRPLVSPGD
        SP P    P   P D
Subjt:  SPAPTSLRPLVSPGD

XP_022959600.1 extensin-like [Cucurbita moschata]9.75e-1745.95Show/hide
Query:  SSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPP---VVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNY-------NNPQQPD
        SS  +PP +  +  LQIS  SR+IKKPPLP   A P   ++KY+++P+II+V+TP +FKYIVQLLTG PN PPP      D  D+         +P QPD
Subjt:  SSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPP---VVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNY-------NNPQQPD

Query:  DHPQGILSPAP
           + +L+P P
Subjt:  DHPQGILSPAP

XP_038885909.1 extensin-like [Benincasa hispida]1.46e-5858.99Show/hide
Query:  MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAP-----PVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQ
        MSSS  PP EG K L QISNNSR IKKPP P K A      PVV+YE EP+II V+TP DFKYIVQLLTGDPNRPPP YPC  + HD    PQ PDD PQ
Subjt:  MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAP-----PVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQ

Query:  GILSPAPTSLRPLVSPGDFTPFPS------------SFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPS-PLPVPQ-PIFRVSPSMY----TE
        GILSP PTSL  LV P  FTP PS            S DQ+   FDLL+E   EP  LS S PV++  P   PPP  P PVP  P FRV PS +    TE
Subjt:  GILSPAPTSLRPLVSPGDFTPFPS------------SFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPS-PLPVPQ-PIFRVSPSMY----TE

Query:  IPPSFYTQQPPMFFPPN
        IPPSF T  PP+FFPPN
Subjt:  IPPSFYTQQPPMFFPPN

TrEMBL top hitse value%identityAlignment
A0A0A0KCP3 Uncharacterized protein1.6e-1840.21Show/hide
Query:  FPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPV-VKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSPAPTS
        +P  EG K +LQIS +S+ IKKPPL    AP +  KYE++P+IINV+T  DF YIVQLLTGDPN PPP+YPCNC     + +P                 
Subjt:  FPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPV-VKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSPAPTS

Query:  LRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMY----TEIPPSFYTQQPPMFFPPN
              P DFTP                     PP L   P    ++P   PPPS      P F+V PS +    TEIPP F     P F+PPN
Subjt:  LRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMY----TEIPPSFYTQQPPMFFPPN

A0A5A7UXK4 Uncharacterized protein1.1e-107100Show/hide
Query:  MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSP
        MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSP
Subjt:  MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSP

Query:  APTSLRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN
        APTSLRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN
Subjt:  APTSLRPLVSPGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN

A0A6J1H6R4 extensin-like1.6e-1345.95Show/hide
Query:  SSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPP---VVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDN-------YNNPQQPD
        SS  +PP +  +  LQIS  SR+IKKPPLP   A P   ++KY+++P+II+V+TP +FKYIVQLLTG PN PPP      D  D+         +P QPD
Subjt:  SSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPP---VVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDN-------YNNPQQPD

Query:  DHPQGILSPAP
           + +L+P P
Subjt:  DHPQGILSPAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTTCGAAATTCCCTCCAAGTGAGGGAACAAAACATCTGCTCCAAATCTCCAACAATTCTCGAAATATCAAGAAGCCGCCACTCCCGACGAAGAGGGCGCCGCC
GGTAGTAAAGTACGAGTTGGAGCCGAGGATCATTAATGTACAAACCCCCACAGACTTCAAATACATTGTCCAACTCCTAACCGGCGACCCCAACCGTCCCCCGCCTGTAT
ACCCCTGTAATTGTGACCACCACGACAATTATAATAATCCTCAACAGCCGGACGACCACCCACAGGGAATTCTGTCCCCGGCTCCCACCTCTCTTCGCCCGCTCGTTTCT
CCCGGTGATTTTACTCCGTTTCCGTCGTCGTTTGATCAAGATTTCAACAGTTTTGATTTGCTTCAAGAATTGGAAGTAGAACCACCCACTTTATCTTTATCCCCTCCTGT
TATTAATATTTCTCCATCGCCTTCCCCTCCTCCGTCGCCTTTGCCAGTACCGCAACCCATTTTCAGAGTTTCTCCGTCGATGTATACGGAAATTCCGCCGAGTTTCTACA
CCCAACAGCCTCCTATGTTCTTCCCACCCAACAGTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTTCGAAATTCCCTCCAAGTGAGGGAACAAAACATCTGCTCCAAATCTCCAACAATTCTCGAAATATCAAGAAGCCGCCACTCCCGACGAAGAGGGCGCCGCC
GGTAGTAAAGTACGAGTTGGAGCCGAGGATCATTAATGTACAAACCCCCACAGACTTCAAATACATTGTCCAACTCCTAACCGGCGACCCCAACCGTCCCCCGCCTGTAT
ACCCCTGTAATTGTGACCACCACGACAATTATAATAATCCTCAACAGCCGGACGACCACCCACAGGGAATTCTGTCCCCGGCTCCCACCTCTCTTCGCCCGCTCGTTTCT
CCCGGTGATTTTACTCCGTTTCCGTCGTCGTTTGATCAAGATTTCAACAGTTTTGATTTGCTTCAAGAATTGGAAGTAGAACCACCCACTTTATCTTTATCCCCTCCTGT
TATTAATATTTCTCCATCGCCTTCCCCTCCTCCGTCGCCTTTGCCAGTACCGCAACCCATTTTCAGAGTTTCTCCGTCGATGTATACGGAAATTCCGCCGAGTTTCTACA
CCCAACAGCCTCCTATGTTCTTCCCACCCAACAGTAATTAA
Protein sequenceShow/hide protein sequence
MSSSKFPPSEGTKHLLQISNNSRNIKKPPLPTKRAPPVVKYELEPRIINVQTPTDFKYIVQLLTGDPNRPPPVYPCNCDHHDNYNNPQQPDDHPQGILSPAPTSLRPLVS
PGDFTPFPSSFDQDFNSFDLLQELEVEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVSPSMYTEIPPSFYTQQPPMFFPPNSN