; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006824 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006824
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr06:798202..800538
RNA-Seq ExpressionIVF0006824
SyntenyIVF0006824
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033710.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.32e-22195.17Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

TYK23004.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.83e-22295.47Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]1.25e-21389.94Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        M IIFTSMTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGN+ +             KYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDE++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_008439301.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo]5.68e-22695.27Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

XP_016899030.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo]1.46e-20994.6Show/hide
Query:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
        +RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
Subjt:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL

Query:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
        ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
Subjt:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT

Query:  KVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
        KVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
Subjt:  KVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW

Query:  SKSNFEHDFMGLGQL
        SKSNFEHDFMGLGQL
Subjt:  SKSNFEHDFMGLGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein7.8e-16789.94Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        M IIFTSMTH LAQATL+SF ASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LES+PRIFFHKMISLYYD+AMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGN+ +             KYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTNS+DEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDE++ +DPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X23.2e-17695.27Show/hide
Query:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
        MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA
Subjt:  MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGA

Query:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
        LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH
Subjt:  LDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMH

Query:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED
        DKLFEVFADMEELGVQPNMAIVTKVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSED
Subjt:  DKLFEVFADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSED

Query:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X11.1e-16394.6Show/hide
Query:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
        +RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL
Subjt:  YRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL

Query:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
        ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT
Subjt:  ENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVT

Query:  KVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
        KVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW
Subjt:  KVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW

Query:  SKSNFEHDFMGLGQL
        SKSNFEHDFMGLGQL
Subjt:  SKSNFEHDFMGLGQL

A0A5A7SS06 Pentatricopeptide repeat-containing protein1.2e-17295.17Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNS NGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein2.5e-17395.47Show/hide
Query:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
        MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW
Subjt:  MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAW

Query:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
        ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF
Subjt:  ELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVF

Query:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
        ADMEELGVQPNMAIVTKVGNI +             KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE
Subjt:  ADMEELGVQPNMAIVTKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE

Query:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
        EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL
Subjt:  EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.9e-4046.31Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V       N  +N K    ++  EY+YI   G+RV+++ +Y 
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL

Query:  SEN
        SE+
Subjt:  SEN

Q8LG95 Pentatricopeptide repeat-containing protein At4g211906.1e-9260.74Show/hide
Query:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L Y+ P   + ++   +  F+  P++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNAL ED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV

Query:  TKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE
        + VG +               KYPPP+WE+RYIKG+RVK++ K L+E    + GLS             DE +I   D+ +E +EE G+D  E  EDE
Subjt:  TKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-4146.31Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V       N  +N K    ++  EY+YI   G+RV+++ +Y 
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL

Query:  SEN
        SE+
Subjt:  SEN

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein1.3e-4146.31Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V       N  +N K    ++  EY+YI   G+RV+++ +Y 
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL

Query:  SEN
        SE+
Subjt:  SEN

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein1.3e-4146.31Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V       N  +N K    ++  EY+YI   G+RV+++ +Y 
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL

Query:  SEN
        SE+
Subjt:  SEN

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein1.3e-4146.31Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+     +V       N  +N K    ++  EY+YI   G+RV+++ +Y 
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVG------NISKNWKYPPPKW--EYRYI--KGKRVKIRTKYL

Query:  SEN
        SE+
Subjt:  SEN

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein4.3e-9360.74Show/hide
Query:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L Y+ P   + ++   +  F+  P++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLVYTFP---VTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNAL ED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIV

Query:  TKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE
        + VG +               KYPPP+WE+RYIKG+RVK++ K L+E    + GLS             DE +I   D+ +E +EE G+D  E  EDE
Subjt:  TKVGNISKNW-----------KYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAATCATTTTCACTTCAATGACACACTATCTAGCCCAAGCAACGCTCGCGTCCTTCTCGGCTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAGTCACGTC
CAAAAGGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAGAAAGAGGA
TTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAG
TTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAAC
AATGGGAAGCTATTTTACGCTATTAAATGCATTAGTTGAAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATTTGGAGAGCATGCCTC
GCATATTCTTTCATAAAATGATATCTCTCTACTACGATCGGGCAATGCACGACAAGTTATTTGAGGTATTTGCTGATATGGAGGAACTTGGGGTTCAACCAAATATGGCA
ATTGTCACTAAGGTTGGAAACATTTCCAAGAATTGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAACGTGTCAAAATACGAACCAAGTATCTGTC
TGAAAATGGTAATTCCAAGAATGGTTTAAGTGAGCAAAACAAAATGGAGCATAGTTCAACAAATTCATTAGATGAAGCTGAAATAACTTCGGAAGATTCCAGTCTCGAAG
ATGATGAGGAAATCGGCAAAGATCCAGATGAAATTCTGGAAGATGAACATATGTGGAGCAAATCCAATTTTGAGCATGATTTCATGGGGCTTGGGCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAATCATTTTCACTTCAATGACACACTATCTAGCCCAAGCAACGCTCGCGTCCTTCTCGGCTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAGTCACGTC
CAAAAGGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAGAAAGAGGA
TTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAG
TTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAAC
AATGGGAAGCTATTTTACGCTATTAAATGCATTAGTTGAAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATTTGGAGAGCATGCCTC
GCATATTCTTTCATAAAATGATATCTCTCTACTACGATCGGGCAATGCACGACAAGTTATTTGAGGTATTTGCTGATATGGAGGAACTTGGGGTTCAACCAAATATGGCA
ATTGTCACTAAGGTTGGAAACATTTCCAAGAATTGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAACGTGTCAAAATACGAACCAAGTATCTGTC
TGAAAATGGTAATTCCAAGAATGGTTTAAGTGAGCAAAACAAAATGGAGCATAGTTCAACAAATTCATTAGATGAAGCTGAAATAACTTCGGAAGATTCCAGTCTCGAAG
ATGATGAGGAAATCGGCAAAGATCCAGATGAAATTCTGGAAGATGAACATATGTGGAGCAAATCCAATTTTGAGCATGATTTCATGGGGCTTGGGCAATTGTAA
Protein sequenceShow/hide protein sequence
MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELE
FPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMA
IVTKVGNISKNWKYPPPKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL