; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006827 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006827
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr01:22165774..22165956
RNA-Seq ExpressionIVF0006827
SyntenyIVF0006827
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.47e-1779.63Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLM
        MP GRPRKHP AEASNA REA MGS ESDAESS P+VEGN+EE+LL+RLAQRL+
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLM

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.16e-1776.67Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA
        MP GRPRKHP A+ SNA REA MGS ESDAESS P+VEGNMEE+LL+RLAQRL+S I SA
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.07e-1673.33Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA
        MP G+PRKHP AEASNA +EA MGS ESDAESS P VE N+EE+LL+RLAQRL+S I SA
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA

KAA0056913.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.64e-1776.27Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIIS
        MP GRPRK PVAEASNA REA M SEE DAESS P+VEGN+EE+LL+RLAQR +SRI S
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIIS

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]9.07e-1673.33Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA
        MP G+PRKHP AEASNA +EA MGS ESDAESS P VE N+EE+LL+RLAQRL+S I SA
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein4.1e-1379.63Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLM
        MP GRPRKHP AEASNA REA MGS ESDAESS P+VEGN+EE+LL+RLAQRL+
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLM

A0A5A7T1M0 Reverse transcriptase3.5e-1273.33Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA
        MP G+PRKHP AEASNA +EA MGS ESDAESS P VE N+EE+LL+RLAQRL+S I SA
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA

A0A5A7ULX5 DNA/RNA polymerases superfamily protein2.4e-1376.27Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIIS
        MP GRPRK PVAEASNA REA M SEE DAESS P+VEGN+EE+LL+RLAQR +SRI S
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIIS

A0A5D3BB91 Reverse transcriptase3.5e-1273.33Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA
        MP G+PRKHP AEASNA +EA MGS ESDAESS P VE N+EE+LL+RLAQRL+S I SA
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA

A0A5D3DES5 DNA/RNA polymerases superfamily protein8.3e-1476.67Show/hide
Query:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA
        MP GRPRKHP A+ SNA REA MGS ESDAESS P+VEGNMEE+LL+RLAQRL+S I SA
Subjt:  MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGGGGTAGACCTCGAAAGCACCCTGTTGCAGAAGCTAGTAACGCTACTAGAGAAGCAACTATGGGAAGTGAGGAGTCTGATGCCGAATCTAGTCATCCCTATGT
TGAAGGGAACATGGAAGAGAAATTACTGGAAAGACTGGCTCAAAGATTGATGTCGAGGATTATATCGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGGGGTAGACCTCGAAAGCACCCTGTTGCAGAAGCTAGTAACGCTACTAGAGAAGCAACTATGGGAAGTGAGGAGTCTGATGCCGAATCTAGTCATCCCTATGT
TGAAGGGAACATGGAAGAGAAATTACTGGAAAGACTGGCTCAAAGATTGATGTCGAGGATTATATCGGCATAA
Protein sequenceShow/hide protein sequence
MPWGRPRKHPVAEASNATREATMGSEESDAESSHPYVEGNMEEKLLERLAQRLMSRIISA