CuGenDBv2

Gene ID	IVF0006829
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Genome location	chr01:14936035..14939584
RNA-Seq Expression	IVF0006829
Synteny	IVF0006829
Gene Ontology terms	GO:0006605 - protein targeting (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0090351 - seedling development (biological process) GO:0009528 - plastid inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit IPR038379 - SecE superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144859.1 uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus]

1.57e-91

92.41

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRMGFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT
        LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT

XP_008447932.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo]

3.24e-104

100

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Query:  MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI
        MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI
Subjt:  MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI

Query:  FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
        FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Subjt:  FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

XP_011658604.1 uncharacterized protein LOC101211352 isoform X3 [Cucumis sativus]

6.59e-72

88.8

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRMGFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLKT
        LIFLVEQPSQLKYIEWPSFQST+++
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLKT

XP_031744310.1 uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus]

8.28e-71

89.52

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRMGFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLK
        LIFLVEQPSQLKYIEWPSFQST++
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLK

XP_038888680.1 uncharacterized protein LOC120078486 [Benincasa hispida]

3.62e-81

81.13

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        MVI S LG + IG +C+PQ K  +HVL YN  R NKS++ QRLHTRISKR+G H+YAGRMGFNHAASGQ+ QQ SFNDEWP EPFFLSLIKET WGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSY+LTL LRRTS
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K1C8 Uncharacterized protein

1.6e-69

92.41

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRMGFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT
        LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT

A0A1S3BJG9 uncharacterized protein LOC103490269

5.0e-79

100

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Query:  MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI
        MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI
Subjt:  MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI

Query:  FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
        FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Subjt:  FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

A0A5A7SIK1 Protein translocase complex, SecE/Sec61-gamma subunit

5.0e-79

100

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Query:  MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI
        MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI
Subjt:  MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLI

Query:  FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
        FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Subjt:  FLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

A0A6J1C3M0 uncharacterized protein LOC111008049

9.9e-51

72.33

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        M I S LG +HIG+IC P PK   H+L  N  R NKS+ FQ+L   IS+RSG HLYAGRM FNHAASG+   Q +FN+E+P EPF LSLI+E  WGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
        LIFLVEQPSQLKYIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR++
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

A0A6J1EK97 uncharacterized protein LOC111435124

7.6e-51

73.58

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Query:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL
        MVI S LG +HIG+  LP     +HV RYN  RLNK+++FQ L TRIS+R G HLYA RMGFNHAASG++ QQ  FNDE P EPFFL +IKET WGLRSL
Subjt:  MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSL

Query:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
         IFL EQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSY+LT +LRRTS
Subjt:  LIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G38490.1 unknown protein

2.8e-21

52.14

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Query:  KRSGQHLYAGRMGFNHA-ASGQNYQQPSFNDEW-------PQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVAL
        K SG     GR+   H   SG      S  + W        +EP +LSL+++  W  RSLL F+ EQPSQLKYIEWP+F STLKTATL+L LVA+ IVAL
Subjt:  KRSGQHLYAGRMGFNHA-ASGQNYQQPSFNDEW-------PQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVAL

Query:  SSVDSALSYVLTLLLRR
        SSVD+AL Y+L L+LR+
Subjt:  SSVDSALSYVLTLLLRR

Sequences

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CDS sequence

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ATGGTGATCACTTCTACACTTGGGACTCATCATATTGGTATAATTTGTCTTCCTCAGCCCAAATACCACGTTTTACGGTACAACGCAACAAGATTGAATAAATCCAGTCT
CTTTCAGAGACTGCACACAAGGATTTCCAAAAGGAGTGGACAACATCTCTATGCTGGGCGAATGGGCTTTAACCATGCTGCATCGGGACAAAATTATCAGCAACCGAGCT
TTAATGATGAATGGCCTCAAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCTTTTGGGGATTGAGATCGTTGTTAATATTTCTGGTTGAGCAGCCCAGTCAACTGAAG
TACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTGTTGATCGTAGCACTCTCATCAGTGGACTCGGCGCTCAGCTA
TGTTTTGACTTTACTTCTCAGAAGAACCTCATAA

mRNA sequence

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GGAGAAAAAGGGAAAGGAGTCTGAAGAACGAAAAACCCTCGTCCGTAGCTCTCACGCTCTCTGTTTGTCTCTCTACTGCCGAAGGCCGTTCTCGACGACGGTCGTTCAAC
GGACGACGGCCAATCAACCGGAAAACAGAGCGAAAAACCCTCCCTCTCTCGACGGTGAAAAGGACAAGGTTATAGAAATTAGAAAAAGGGAAAAAAAAAAGCCTTTTCAT
TTCTTCATCTCCCTCTCCTTTGCAGCTGCCAAGCCCACCCCGTTGCAAACCTCTTTGCCGGCAACCACGTACCACGAGCGACGGCCGGCGAGTCTCCTACTACAAAGGCC
CTAAATTCTTCTTGATTTCGACAACCTCATATCCCGTCAGCTCGTGTTGACGGCAGTACCCACGAAACCCAACGAGGTGACTGCGTTAGCTTCGTGGGTGTACTCTTTTT
TTTACGTGGTGTTGTTGAACTCTTGCTCTAAAATGGTGATCACTTCTACACTTGGGACTCATCATATTGGTATAATTTGTCTTCCTCAGCCCAAATACCACGTTTTACGG
TACAACGCAACAAGATTGAATAAATCCAGTCTCTTTCAGAGACTGCACACAAGGATTTCCAAAAGGAGTGGACAACATCTCTATGCTGGGCGAATGGGCTTTAACCATGC
TGCATCGGGACAAAATTATCAGCAACCGAGCTTTAATGATGAATGGCCTCAAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCTTTTGGGGATTGAGATCGTTGTTAA
TATTTCTGGTTGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTGTTGATCGTA
GCACTCTCATCAGTGGACTCGGCGCTCAGCTATGTTTTGACTTTACTTCTCAGAAGAACCTCATAATAAATGTTGGTACTCTTCTCCTACTGGTCTATCAGTAGGTCAGA
AATTTAACTTCTCTTTGCCATTTTTAAAATGATTGCTCAGAGGGAAAGTTTTTGATATGTCAATGTAGTTGGAGATATTCTGAAATAGGTAATGCAAAACTCTTTGAAAT
CGCCCAACTAGGAAGGTAGAGAATGTCATTTTCCATGTTTCTCACATACATGTACTTACGACCATC

Protein sequence

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MVITSTLGTHHIGIICLPQPKYHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRMGFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLK
YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS

IVF0006829 (gene) of Melon (IVF77) v1 genome