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IVF0006852 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006852
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr08:11970301..11970558
RNA-Seq ExpressionIVF0006852
SyntenyIVF0006852
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025769.1 hypothetical protein E6C27_scaffold34G00120 [Cucumis melo var. makuwa]9.49e-53100Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.66e-2765.88Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQRL  G+RLAQ+D EKKYGIER+KALGAT F GT + V+ E WLTLIEKCF V  C EDRKVELA FLL+  AED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.29e-2764.71Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQRL  G+R AQ+D EKKYG ER+KALGAT F GT +  +VEAWLTLIEKCF V   LEDRKVELA FLL+  AED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

KAA0047616.1 uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa]2.29e-2761.18Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQ L  G+R AQ++LEK + IER+KALGAT F GT +  + EAWLTLIEKCF VM CLEDRKVEL  FLLK   ED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]8.31e-2764.71Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQRL  G+R AQ+D EKKYG ER+KALGAT F GT +  +VEAWLTLIEKCF V   LEDRKVELA FLL+  AED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein1.4e-2265.88Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQRL  G+RLAQ+D EKKYGIER+KALGAT F GT + V+ E WLTLIEKCF V  C EDRKVELA FLL+  AED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

A0A5A7SKG0 Uncharacterized protein5.6e-40100Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

A0A5A7T1M0 Reverse transcriptase5.2e-2264.71Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQRL  G+R AQ+D EKKYG ER+KALGAT F GT +  +VEAWLTLIEKCF V   LEDRKVELA FLL+  AED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

A0A5D3BB91 Reverse transcriptase5.2e-2264.71Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED
        +EE++ +++AQRL  G+R AQ+D EKKYG ER+KALGAT F GT +  +VEAWLTLIEKCF V   LEDRKVELA FLL+  AED
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

A0A5D3DES5 DNA/RNA polymerases superfamily protein2.6e-2166.25Show/hide
Query:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLK
        MEE++ +++AQRL  G+R AQ+D EKKYGIER+KALGAT F GT +  + EAWLTLIEKCF V  C EDRKVELA+FLL+
Subjt:  MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGCGTATCTTTAATAAGATAGCTCAGAGGTTGGCTGACGGTGTTAGGTTAGCTCAAGCAGATCTTGAGAAGAAATATGGCATTGAGAGGATGAAAGCTCTAGG
TGCCACTCCGTTTAAGGGGACTGTAGATTCTGTTGAAGTGGAGGCATGGTTGACGTTGATAGAGAAATGTTTCTGGGTTATGCATTGTCTGGAAGACAGAAAAGTGGAAT
TAGCCACGTTCCTGCTTAAAAAAAGAGCAGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGCGTATCTTTAATAAGATAGCTCAGAGGTTGGCTGACGGTGTTAGGTTAGCTCAAGCAGATCTTGAGAAGAAATATGGCATTGAGAGGATGAAAGCTCTAGG
TGCCACTCCGTTTAAGGGGACTGTAGATTCTGTTGAAGTGGAGGCATGGTTGACGTTGATAGAGAAATGTTTCTGGGTTATGCATTGTCTGGAAGACAGAAAAGTGGAAT
TAGCCACGTTCCTGCTTAAAAAAAGAGCAGAGGATTGA
Protein sequenceShow/hide protein sequence
MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED