; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006872 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006872
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGATA-N domain-containing protein
Genome locationchr10:12355057..12356586
RNA-Seq ExpressionIVF0006872
SyntenyIVF0006872
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR008013 - GATA-type transcription activator, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146444.1 uncharacterized protein LOC101211273 [Cucumis sativus]6.10e-11495.93Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
        MVAI PSHGGFPSQLGQGWKSVRGRPDRRSSNLRV AEKGEERES GGENKKSLFSSVTEALDFSAVRS+RDAELLDDARQATKAGGRM+REQYGALRRK
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK

Query:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSS GNFFSK FSK
Subjt:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

XP_008456929.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo]3.99e-119100Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
        MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK

Query:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
Subjt:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

XP_022941869.1 uncharacterized protein LOC111447101 [Cucurbita moschata]1.13e-9484.75Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG
        MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLFSSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYG
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

XP_023532465.1 uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]5.60e-9584.09Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG-ENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGA
        MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  G  +NK+SLFSSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYGA
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG-ENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGA

Query:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Subjt:  LRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

XP_038891315.1 uncharacterized protein LOC120080762 [Benincasa hispida]2.16e-10893.79Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG--ENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG
        MVAISPSHGGFPSQL QGWK+VRGRPDR SSNLRV+A   EKGEERES GG  ENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG--ENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKS SSSGNFFSKLFSK
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

TrEMBL top hitse value%identityAlignment
A0A0A0KM41 GATA-N domain-containing protein1.6e-8695.93Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
        MVAI PSHGGFPSQLGQGWKSVRGRPDRRSSNLRV AEKGEERES GGENKKSLFSSVTEALDFSAVRS+RDAELLDDARQATKAGGRM+REQYGALRRK
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK

Query:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSS GNFFSK FSK
Subjt:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

A0A1S3C3X8 uncharacterized protein LOC1034967311.8e-90100Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
        MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK

Query:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
Subjt:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

A0A5D3DFR3 GATA-N domain-containing protein1.8e-90100Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
        MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRK

Query:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
Subjt:  IGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

A0A6J1FPP4 uncharacterized protein LOC1114471016.5e-7284.75Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG
        MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLFSSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYG
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

A0A6J1K2I3 uncharacterized protein LOC1114918084.0e-6981.92Show/hide
Query:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG
        MVAISPS+ GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  G E  NK+SLFSSVTEALDFS VRSSRDAELL+DARQATK+GGRM++EQYG
Subjt:  MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYG

Query:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Subjt:  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56290.1 unknown protein2.8e-5169.57Show/hide
Query:  VMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKK
        V A++ ++ +    E + SLF+ +T+ALDFS VRS +DAELL +AR+ATK+G +MT+EQYGALRRKIGGTYKDFFKSY+EVDGQYVEEGWVDKTCK+CKK
Subjt:  VMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKK

Query:  DTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
        DT+GEARQVDKLGRY HV+CL+  N  SGNFF++LFS+
Subjt:  DTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCGATTTCTCCGTCTCACGGGGGGTTCCCATCGCAATTAGGGCAGGGATGGAAGTCTGTAAGGGGGAGGCCTGATAGGAGGAGCTCCAATTTGAGAGTAATGGC
GGAGAAGGGCGAGGAGAGAGAAAGCGTCGGAGGAGAGAATAAGAAATCGCTGTTCAGCAGTGTGACGGAGGCGTTGGATTTCTCGGCAGTGCGATCGAGTCGCGACGCCG
AGCTCCTCGACGATGCCCGCCAGGCCACCAAAGCGGGCGGCAGAATGACCCGTGAACAGTACGGAGCTTTAAGAAGGAAAATTGGAGGGACCTACAAGGACTTCTTCAAA
TCTTACATCGAAGTGGATGGACAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGAGGAGAAGCAAGACAAGTTGACAAACTTGG
AAGATACGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCGGGGAATTTCTTTTCCAAGCTCTTCTCCAAATGA
mRNA sequenceShow/hide mRNA sequence
TGTCCCTAGTACGACACAAACATGTGAATCTCAAGAGTCAATCTCCCATCTCTTTGGTAGGCATAAATGAATTGAACTATTATATTCCTAAGATTAATAACCAAGCATAA
AAAAATCAAGTGGCCATGGAAAATGGAGAAATCAAGAGTATCAGACAAAGCCACGTAGCTCCACTCCAGGGCAACCACAACGACCAATCACTGCTGACCTCAAATTTTCA
CTTATAAGCCCTGAGCAACTCCTCGTTCATGGCGGATAATCGTCGAGGTCGCCGTCGATCCTATAAATTTGAGGTTCAATTGAACGAACTAACCGGCGGCGACGATGGTG
GCGATTTCTCCGTCTCACGGGGGGTTCCCATCGCAATTAGGGCAGGGATGGAAGTCTGTAAGGGGGAGGCCTGATAGGAGGAGCTCCAATTTGAGAGTAATGGCGGAGAA
GGGCGAGGAGAGAGAAAGCGTCGGAGGAGAGAATAAGAAATCGCTGTTCAGCAGTGTGACGGAGGCGTTGGATTTCTCGGCAGTGCGATCGAGTCGCGACGCCGAGCTCC
TCGACGATGCCCGCCAGGCCACCAAAGCGGGCGGCAGAATGACCCGTGAACAGTACGGAGCTTTAAGAAGGAAAATTGGAGGGACCTACAAGGACTTCTTCAAATCTTAC
ATCGAAGTGGATGGACAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGAGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATA
CGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCGGGGAATTTCTTTTCCAAGCTCTTCTCCAAATGAAAACAAAAGTTAGATTTAAGTATATAAATATGACCAT
ATAAATTTGAAATTGTGCAACGTGTATTTGGTTCATAAGTTTAGAGAACATTGTATCATATAAATTTTGAGTTTCAGTTTTATATATACAATTGTGAGAGATATAGATCA
AATAAGCATAGT
Protein sequenceShow/hide protein sequence
MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFK
SYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK