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IVF0006906 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006906
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:22687116..22687397
RNA-Seq ExpressionIVF0006906
SyntenyIVF0006906
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049584.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.47e-1859.49Show/hide
Query:  MKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFR
        M+NA Y A VLNLSD+VLRE I             ELY+S DL NRAY RER FTFKMD NK LT +L EFK+LSS+F+
Subjt:  MKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFR

KAA0059755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.16e-2666.67Show/hide
Query:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFR
        MTQE+KETM+ AAY A VLNLSDNV+RE I             ELYQS DL N AYVRER FTFKMD N SL ENL EFKKLSSDF+
Subjt:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFR

KAA0063883.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.17e-3275Show/hide
Query:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        MT EEKETM+NA Y A VLNLSDNVLRE I             ELYQS DLPNRAYVRER FTFKMDGNKSLTENL EFKKLSSDFRE
Subjt:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

TYJ96960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.17e-2868.18Show/hide
Query:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        MTQEEKETM+N AY A VLNLSDNVL+E I             ELYQS DLPNRAY+RER  T+KMD NKSL ENL EFKKLS DFRE
Subjt:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

TYK28110.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.49e-2365Show/hide
Query:  MKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        M+NA Y A VLNLSDNVLRE I             ELYQ  DLPNRA+VRER FTFKMD NK + ENLEEFKKLSS+F+E
Subjt:  MKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

TrEMBL top hitse value%identityAlignment
A0A5A7V1L8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-1866.67Show/hide
Query:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFR
        MTQE+KETM+ AAY A VLNLSDNV+RE I             ELYQS DL N AYVRER FTFKMD N SL ENL EFKKLSSDF+
Subjt:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFR

A0A5A7V6Z9 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-2375Show/hide
Query:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        MT EEKETM+NA Y A VLNLSDNVLRE I             ELYQS DLPNRAYVRER FTFKMDGNKSLTENL EFKKLSSDFRE
Subjt:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

A0A5D3BAU2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-2068.18Show/hide
Query:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        MTQEEKETM+N AY A VLNLSDNVL+E I             ELYQS DLPNRAY+RER  T+KMD NKSL ENL EFKKLS DFRE
Subjt:  MTQEEKETMKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

A0A5D3CAI4 Retrovirus-related Pol polyprotein from transposon TNT 1-947.9e-1286.67Show/hide
Query:  ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        ELYQS DLPNRAYVRER FTFKMD NKSL ENL EFKKLSSDF+E
Subjt:  ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

A0A5D3DXZ1 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-1665Show/hide
Query:  MKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE
        M+NA Y A VLNLSDNVLRE I             ELYQ  DLPNRA+VRER FTFKMD NK + ENLEEFKKLSS+F+E
Subjt:  MKNAAYDAKVLNLSDNVLREAI-------------ELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAAGAAGAAAAAGAAACTATGAAAAATGCGGCCTATGATGCCAAAGTTTTAAACCTAAGTGACAATGTTCTTAGGGAGGCCATTGAACTTTATCAGTCTACAGA
CTTACCTAACCGTGCATACGTGAGGGAGAGGTTATTTACCTTCAAGATGGATGGCAACAAATCTTTGACAGAGAATCTTGAAGAATTCAAGAAGTTGTCTTCAGATTTCA
GAGAATGGGAGACAAATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCAAGAAGAAAAAGAAACTATGAAAAATGCGGCCTATGATGCCAAAGTTTTAAACCTAAGTGACAATGTTCTTAGGGAGGCCATTGAACTTTATCAGTCTACAGA
CTTACCTAACCGTGCATACGTGAGGGAGAGGTTATTTACCTTCAAGATGGATGGCAACAAATCTTTGACAGAGAATCTTGAAGAATTCAAGAAGTTGTCTTCAGATTTCA
GAGAATGGGAGACAAATTGGTGA
Protein sequenceShow/hide protein sequence
MTQEEKETMKNAAYDAKVLNLSDNVLREAIELYQSTDLPNRAYVRERLFTFKMDGNKSLTENLEEFKKLSSDFREWETNW