; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006937 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006937
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase H domain-containing protein
Genome locationchr09:7593068..7602261
RNA-Seq ExpressionIVF0006937
SyntenyIVF0006937
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143798.1 uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus]1.20e-23388.36Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN  S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADAQANLALTLA+GE+QE ED
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED

XP_008465682.1 PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo]9.65e-25996.81Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED

XP_008465683.1 PREDICTED: uncharacterized protein LOC103503315 isoform X2 [Cucumis melo]4.34e-24096.57Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR

XP_008465684.1 PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo]3.74e-24096.57Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR

XP_011655308.1 uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus]3.92e-21788.14Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG
        GS+VLTPT      +DPTRKHIKLEDSIVS  +SSN  S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHL
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR L
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHL

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ9 RNase H domain-containing protein3.0e-18388.36Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDC AQIGSSICDLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGETSGQDAIKKRSREAIV ENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIV--SLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG
        GS+VL     TPT +DPTRKHIKLEDSIV  S+SSN  S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIV--SLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG

Query:  FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
        FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADAQANLALTLA+GE+QE ED
Subjt:  FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED

A0A1S3CPG2 uncharacterized protein LOC103503315 isoform X32.4e-18896.57Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR

A0A1S3CPT7 uncharacterized protein LOC103503315 isoform X11.7e-20296.81Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED

A0A1S3CQX0 uncharacterized protein LOC103503315 isoform X22.4e-18896.57Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR

A0A5A7TCE2 RNase H family protein, putative isoform 21.7e-20296.81Show/hide
Query:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
        MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD
Subjt:  MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGD

Query:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
        VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV
Subjt:  VVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENV

Query:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
        GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH S         + NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Subjt:  GSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSM------VPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT

Query:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
        RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED
Subjt:  RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI7.6e-0634.95Show/hide
Query:  EGLGIA--------TNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLA
        EG G+A        TNNVAEY  ++  ++  L+ G +   ++GDS+LV  Q+ G +K K + I  L  + ++LK K L+  +  V R  N EAD  + +A
Subjt:  EGLGIA--------TNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLA

Query:  LTL
          L
Subjt:  LTL

P64956 Uncharacterized protein Mb2253c4.4e-1441.67Show/hide
Query:  NPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNH
        NPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G T   V  DSKLV  Q+ G WK K+ ++ +L  +   L ++F       
Subjt:  NPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNH

Query:  VLRHLNSEADAQANLALTLA
        V R  N+ AD  AN A+  A
Subjt:  VLRHLNSEADAQANLALTLA

P9WLH4 Uncharacterized protein MT22874.4e-1441.67Show/hide
Query:  NPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNH
        NPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G T   V  DSKLV  Q+ G WK K+ ++ +L  +   L ++F       
Subjt:  NPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNH

Query:  VLRHLNSEADAQANLALTLA
        V R  N+ AD  AN A+  A
Subjt:  VLRHLNSEADAQANLALTLA

P9WLH5 Bifunctional protein Rv2228c4.4e-1441.67Show/hide
Query:  NPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNH
        NPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G T   V  DSKLV  Q+ G WK K+ ++ +L  +   L ++F       
Subjt:  NPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNH

Query:  VLRHLNSEADAQANLALTLA
        V R  N+ AD  AN A+  A
Subjt:  VLRHLNSEADAQANLALTLA

Q9HSF6 Ribonuclease HI1.1e-1237.93Show/hide
Query:  NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHV
        NPG A  G VL + DG ++    + +G ATNN AEY A++  L+ A   GF  I ++GDS+LV  Q+ G W   + ++        +L   F  + + HV
Subjt:  NPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHV

Query:  LRHLNSEADAQANLAL
         R  N  ADA AN AL
Subjt:  LRHLNSEADAQANLAL

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein1.1e-7341.22Show/hide
Query:  MNCLSQVSTYTRV-IFRRTNLVFAASTSIHGCSNPYWSSTFHNV----AVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFV
        MNCLS   +Y  + + +R++ V          S+  W+  F  +     +K  A+ S+     +  YS+R      K  S +        ++ E   FFV
Subjt:  MNCLSQVSTYTRV-IFRRTNLVFAASTSIHGCSNPYWSSTFHNV----AVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFV

Query:  VRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAI
        VRKGDV+G+YK  SDC AQ+GSS+ DLPVSV+KG+SLPKD+EEYL+S+GLK  LY+++A+D++ D+FG+L PC F +        +  +   + +S++  
Subjt:  VRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAI

Query:  VSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSMV-----PQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALK
          +   +S+         S DP  K  K+E S  +  S+    +      + NPG +GA AVL+  DGS+ICR+R+GLGIATNN AEY A++LGLK+A++
Subjt:  VSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSMV-----PQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALK

Query:  KGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ
        KG+  I V+GDSKLVCMQ++G WK  +E +++L  E   L NK +SFE++HVLR+LN++AD QANLA+ L +GE++
Subjt:  KGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-6545.12Show/hide
Query:  MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQD
        ME E   F++VRKGD++GVY+S S+C  Q GSS+    +SV+KG+  PK +E+ L+S G+KNAL+++ A+ ++ D FG L+PC      +S  GE+  + 
Subjt:  MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQD

Query:  AIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLE-DSIVSLSSNHNSMVPQR---------------NPGQAGAGAVLRAHDGSVICRLREGLG
        +  KR ++    E+ GS           S  P +K +K+E D +  + S+  +  P R               NPG+AGAGAVLRA D SV+  LREG+G
Subjt:  AIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLE-DSIVSLSSNHNSMVPQR---------------NPGQAGAGAVLRAHDGSVICRLREGLG

Query:  IATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ
         ATNNVAEYRA+LLGL+ AL KGF  +HV GDS LVCMQVQG WK  +  ++ELC +  +L N F +F++ H+ R  NSEAD QAN A+ LADG+ Q
Subjt:  IATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-6545.12Show/hide
Query:  MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQD
        ME E   F++VRKGD++GVY+S S+C  Q GSS+    +SV+KG+  PK +E+ L+S G+KNAL+++ A+ ++ D FG L+PC      +S  GE+  + 
Subjt:  MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQD

Query:  AIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLE-DSIVSLSSNHNSMVPQR---------------NPGQAGAGAVLRAHDGSVICRLREGLG
        +  KR ++    E+ GS           S  P +K +K+E D +  + S+  +  P R               NPG+AGAGAVLRA D SV+  LREG+G
Subjt:  AIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLE-DSIVSLSSNHNSMVPQR---------------NPGQAGAGAVLRAHDGSVICRLREGLG

Query:  IATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ
         ATNNVAEYRA+LLGL+ AL KGF  +HV GDS LVCMQVQG WK  +  ++ELC +  +L N F +F++ H+ R  NSEAD QAN A+ LADG+ Q
Subjt:  IATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ

AT5G51080.1 RNase H family protein3.9e-6639.84Show/hide
Query:  MNCLSQVSTY-TRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKG
        MN  S+  +Y + V+FR+++ V          S+  W+  F+  ++K++   +  S   + CYS+R      K +  S  +      + E   FFVVRKG
Subjt:  MNCLSQVSTY-TRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKG

Query:  DVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHD--GDASLTGETSGQDAIKKRSREAIVS
        D+VG+YK   DC AQ+GSS+ D PVSV+KG+SL KD+EE L+++GLK  LY  +A D++ D+FG+L PC F D    AS++ E   +             
Subjt:  DVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHD--GDASLTGETSGQDAIKKRSREAIVS

Query:  ENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSMVPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIH
               L P++ T             E  I+           + NPG +GA AVL+  DGS+I ++R+GLGIATNN AEY  ++LGLK A++KG+T+I 
Subjt:  ENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSMVPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIH

Query:  VQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ
        V+ DSKLVCMQ++G WK  +E +S+L  E  +L +K LSFE++HVLR LNS+AD QAN+A  L++GE++
Subjt:  VQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ

AT5G51080.2 RNase H family protein3.9e-6639.84Show/hide
Query:  MNCLSQVSTY-TRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKG
        MN  S+  +Y + V+FR+++ V          S+  W+  F+  ++K++   +  S   + CYS+R      K +  S  +      + E   FFVVRKG
Subjt:  MNCLSQVSTY-TRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKG

Query:  DVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHD--GDASLTGETSGQDAIKKRSREAIVS
        D+VG+YK   DC AQ+GSS+ D PVSV+KG+SL KD+EE L+++GLK  LY  +A D++ D+FG+L PC F D    AS++ E   +             
Subjt:  DVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHD--GDASLTGETSGQDAIKKRSREAIVS

Query:  ENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSMVPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIH
               L P++ T             E  I+           + NPG +GA AVL+  DGS+I ++R+GLGIATNN AEY  ++LGLK A++KG+T+I 
Subjt:  ENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHNSMVPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIH

Query:  VQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ
        V+ DSKLVCMQ++G WK  +E +S+L  E  +L +K LSFE++HVLR LNS+AD QAN+A  L++GE++
Subjt:  VQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGCCTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATCCCTACTGGAG
CTCAACCTTTCACAATGTCGCTGTAAAGGCTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCAA
CTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCTATGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGAT
TGTCATGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACAGTGAGGAATATCTTGCTTCCATTGGGCTTAAGAA
CGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGATGGAGATGCTTCTCTTACAGGTGAGACTTCTGGCC
AAGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAAATGTTGGGTCGTCTGTTTTAACTCCTACATCAGTAACTCCTACATCAGAAGATCCCACGAGGAAA
CATATCAAGTTGGAAGATTCCATTGTGTCCCTATCCTCCAACCACAATTCGATGGTGCCTCAAAGGAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGA
TGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTTTGCACTTAAGAAAGGGTTCA
CTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAGGCAAAAAATGAAAATATATCTGAGTTATGTAATGAAGTTGTGAAGCTG
AAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGCATCTAAACTCAGAAGCCGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGACGGCGAAATCCAGGA
GTCTGAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTGCCTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATCCCTACTGGAG
CTCAACCTTTCACAATGTCGCTGTAAAGGCTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCAA
CTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCTATGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGAT
TGTCATGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACAGTGAGGAATATCTTGCTTCCATTGGGCTTAAGAA
CGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGATGGAGATGCTTCTCTTACAGGTGAGACTTCTGGCC
AAGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAAATGTTGGGTCGTCTGTTTTAACTCCTACATCAGTAACTCCTACATCAGAAGATCCCACGAGGAAA
CATATCAAGTTGGAAGATTCCATTGTGTCCCTATCCTCCAACCACAATTCGATGGTGCCTCAAAGGAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGA
TGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTTTGCACTTAAGAAAGGGTTCA
CTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAGGCAAAAAATGAAAATATATCTGAGTTATGTAATGAAGTTGTGAAGCTG
AAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGCATCTAAACTCAGAAGCCGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGACGGCGAAATCCAGGA
GTCTGAAGATTAA
Protein sequenceShow/hide protein sequence
MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSD
CHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRK
HIKLEDSIVSLSSNHNSMVPQRNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKL
KNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED