; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0006975 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006975
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionleucine-rich repeat extensin-like protein 6
Genome locationtig00000430:691923..692950
RNA-Seq ExpressionIVF0006975
SyntenyIVF0006975
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049526.1 Nutrient reservoir [Cucumis melo var. makuwa]4.51e-8387.66Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPPRGIIGPGGYYQPPPYNNYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

KGN57146.1 hypothetical protein Csa_010613 [Cucumis sativus]1.27e-6877.92Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME PI LQ LISLT LLLL     SSLPVFHPRSSAGAKYQIECTMCSACDNPC QYLSPPPPPPSPPPPVNCPPPPSPP+SGTYDYYSPPPP AQP+YT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPP GIIGPGGYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

XP_022955565.1 leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]2.55e-5668.83Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME  ISL+  ISLT +LL      SSLP    R+ AGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPP +NCPPPPSPP+SGTY YYSPPPPP+QPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPP G  GP GYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

XP_022979944.1 leucine-rich repeat extensin-like protein 6 [Cucurbita maxima]7.30e-5668.18Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME  ISL+  ISLT +LL      SSLP    R+ AGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPP ++CPPPPSPP+SGTY YYSPPPPP+QPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPP G  GP GYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

XP_023526139.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]2.08e-5568.18Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME  ISL++ ISLT +LL      SSLP    R+ AGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPP +NCPPPPSPP+SGTY YYSPPPPP+QPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSS PPP G  GP GYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

TrEMBL top hitse value%identityAlignment
A0A0A0LAN7 Nutrient reservoir1.2e-5377.92Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME PI LQ LISLT LLLL     SSLPVFHPRSSAGAKYQIECTMCSACDNPC QYLSPPPPPPSPPPPVNCPPPPSPP+SGTYDYYS PPPPAQP+YT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPP GIIGPGGYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

A0A5A7U5R9 Nutrient reservoir1.2e-6487.66Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPPRGIIGPGGYYQPPPYNNYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

A0A6J1C7N8 leucine-rich repeat extensin-like protein 32.4e-4167.52Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGA---KYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQP
        ME    L+ L+ L  +LL+      SLP    R+SAGA   KYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPP+SGTY YYS PPPPAQP
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGA---KYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQP

Query:  TYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        TYTYSSPPPPRGII  GGYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  TYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

A0A6J1GVF6 leucine-rich repeat extensin-like protein 63.1e-4468.83Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME  ISL+  ISLT +LL      SSLP    R+ AGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPP +NCPPPPSPP+SGTY YYSPPPPP+QPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPP G  GP GYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

A0A6J1IXZ9 leucine-rich repeat extensin-like protein 66.8e-4468.18Show/hide
Query:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT
        ME  ISL+  ISLT +LL      SSLP    R+ AGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPP ++CPPPPSPP+SGTY YYSPPPPP+QPTYT
Subjt:  MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYT

Query:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA
        YSSPPPP G  GP GYYQPPPY+NYPAP P  P+  + +F    H    PPP +
Subjt:  YSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSA

SwissProt top hitse value%identityAlignment
P06599 Extensin1.3e-0447.67Show/hide
Query:  QYLSPPPPPP---SPPPPVNCPPPPSPPTSGTYDYYSPP-----PPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIP
        +Y SPPPP P   SPPPP + PPPP+P     Y Y SPP     PPP  P Y Y SPPPP     P  Y  PPP ++Y    P  P
Subjt:  QYLSPPPPPP---SPPPPVNCPPPPSPPTSGTYDYYSPP-----PPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRPRIP

Q9LUI1 Leucine-rich repeat extensin-like protein 61.0e-0444.68Show/hide
Query:  AKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYS-PPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP
        + Y I+C       +P      PPPPPP PPPP   PPPP PP    Y Y S PPPPP+ P Y Y  PPPP         Y PPP   Y  P P
Subjt:  AKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYS-PPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP

Q9T0K5 Leucine-rich repeat extensin-like protein 33.9e-0448.78Show/hide
Query:  PCGQYLSPP----PPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP
        P   + +PP    PPPPSPPPPV  PPPP PP    Y    PPPPP  P   YS PPPP     P   Y PPP +  P P P
Subjt:  PCGQYLSPP----PPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP

Arabidopsis top hitse value%identityAlignment
AT3G06750.1 hydroxyproline-rich glycoprotein family protein4.5e-0844.72Show/hide
Query:  SLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGII
        +L+ LL+LL+    SLP+            + CTMCS+CDNPC    +P P   SPPP    PPP S    G+Y YYSPPPP +     Y   PPP G  
Subjt:  SLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGII

Query:  GPGGYYQPPPYNNYPAPRPRIPL
        G GGYY PP Y NY  P P  P+
Subjt:  GPGGYYQPPPYNNYPAPRPRIPL

AT3G22800.1 Leucine-rich repeat (LRR) family protein7.3e-0644.68Show/hide
Query:  AKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYS-PPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP
        + Y I+C       +P      PPPPPP PPPP   PPPP PP    Y Y S PPPPP+ P Y Y  PPPP         Y PPP   Y  P P
Subjt:  AKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYS-PPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP

AT4G13340.1 Leucine-rich repeat (LRR) family protein2.8e-0548.78Show/hide
Query:  PCGQYLSPP----PPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP
        P   + +PP    PPPPSPPPPV  PPPP PP    Y    PPPPP  P   YS PPPP     P   Y PPP +  P P P
Subjt:  PCGQYLSPP----PPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYNNYPAPRP

AT4G16140.1 proline-rich family protein2.8e-1044.63Show/hide
Query:  ECTMCSACDNPCGQYLSPPPPP--PSPPPP----VNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYN--NYPAPRPRIPL
        +CTMC++CDNPC    SPPPPP  PSPPPP      CPPPPS    G Y YY    PPA  + +Y  PP        GGYY PPP +  NYP   P  P+
Subjt:  ECTMCSACDNPCGQYLSPPPPP--PSPPPP----VNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPPPYN--NYPAPRPRIPL

Query:  SRISHFITTLHRRALPPPSAV
          + +F    +    PPP +V
Subjt:  SRISHFITTLHRRALPPPSAV

AT5G49280.1 hydroxyproline-rich glycoprotein family protein1.5e-1143.71Show/hide
Query:  LISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPP----VNCPPPPSPPTS-GTYDYYSPPPPPAQPTYTYSSP
        L +L+ L+++LL   S  P    +        + CTMCS+CDNPC    S  PPPPSPPPP      CPPPPSPP+S G   YY PPP  +     Y  P
Subjt:  LISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPP----VNCPPPPSPPTS-GTYDYYSPPPPPAQPTYTYSSP

Query:  PPPRGIIGPGGYYQPPPYN-NYPAPRPRIPLSRISHFITTLHRRALPPPSA
        PP  G  G  GYY PPPY+ NYP P P  P+  + +F    H    PPP +
Subjt:  PPPRGIIGPGGYYQPPPYN-NYPAPRPRIPLSRISHFITTLHRRALPPPSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCCCATTTCTCTCCAAATTCTCATCTCTCTCACCCCCCTTCTCCTCCTTCTTCTCCCCAGAACTTCCTCTCTTCCGGTCTTCCACCCCCGATCCTCCGCCGG
CGCTAAATACCAAATTGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGTGGTCAGTATCTCTCTCCCCCGCCTCCTCCACCGTCCCCTCCTCCGCCTGTCAACTGTC
CGCCCCCCCCTTCTCCTCCCACCTCCGGCACCTACGACTATTACTCTCCCCCTCCGCCGCCAGCTCAACCCACTTACACATACTCCTCCCCACCGCCGCCGCGTGGAATC
ATCGGACCCGGCGGATACTACCAACCTCCGCCGTATAATAATTACCCAGCTCCCCGCCCCCGAATCCCATTGTCCCGTATTTCCCATTTTATTACCACACTCCACCGCCG
GGCTCTTCCGCCGCCGTCGGCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
CCTCAAACGTGTCGGTTTCATACTCTCCCCTTTCACCCTTTTACTTCCCATCTTCTTCTACTTTCACCCCACCTTTTTCTCTTAATTCATAAACCACCCCCACTGTTTCT
AAAAACCACACACCCCAACTCCACTTCACTTCACTTCACTAATCTCCTTTCTAATCCCCTTTCCTCTCTCCAATGGAAGCTCCCATTTCTCTCCAAATTCTCATCTCTCT
CACCCCCCTTCTCCTCCTTCTTCTCCCCAGAACTTCCTCTCTTCCGGTCTTCCACCCCCGATCCTCCGCCGGCGCTAAATACCAAATTGAATGCACAATGTGCTCTGCTT
GCGACAATCCCTGTGGTCAGTATCTCTCTCCCCCGCCTCCTCCACCGTCCCCTCCTCCGCCTGTCAACTGTCCGCCCCCCCCTTCTCCTCCCACCTCCGGCACCTACGAC
TATTACTCTCCCCCTCCGCCGCCAGCTCAACCCACTTACACATACTCCTCCCCACCGCCGCCGCGTGGAATCATCGGACCCGGCGGATACTACCAACCTCCGCCGTATAA
TAATTACCCAGCTCCCCGCCCCCGAATCCCATTGTCCCGTATTTCCCATTTTATTACCACACTCCACCGCCGGGCTCTTCCGCCGCCGTCGGCCGTTTGACGAATTCCTT
GCCTTGCTCTGTTCTTACCGTTGCTCTGTTTTCCTTTTTACTTGTTTTGTTTTAAATGCAAATAACAGCAGACAGAAACTTTCAATAATGGCGGATTTTGCAGATCTGGG
AAATTGATGGAGCTAAATGAGAAAGAGAAATTGAAGAAAAAAAAAAGAGGGGGGTTTCGATCTTCGAAGAAGACGATGAGAAATTCGCTTCAAGAATTTGCATTTTGTTG
GGGTAAAGAAATTTTCTTTCTCATCCGGAAATTTCCTCAAAAATCTCTTTCTTTCTTACTTGACTCCATTGTTATTAGATTGATTTGTAATCTGCTGATTATATATAAAC
TGTATGTGTTTTTACTTGTATTCTTTACTCAATTCCTC
Protein sequenceShow/hide protein sequence
MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGI
IGPGGYYQPPPYNNYPAPRPRIPLSRISHFITTLHRRALPPPSAV