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IVF0006982 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0006982
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR3-like
Genome locationchr12:2033817..2034356
RNA-Seq ExpressionIVF0006982
SyntenyIVF0006982
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607237.1 hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]8.76e-3668.63Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLL Y+ SK  D + D + ++        V+DDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSSEIQSLFPA+FLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GG
        GG
Subjt:  GG
KAG7036922.1 hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]1.39e-3969.16Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLL Y+ SK  D + D + ++        VQDDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSSEIQSLFPA+FLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GGKIKRV
        GGK+KR+
Subjt:  GGKIKRV
XP_011658114.1 cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus]4.61e-6292.66Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLLRYVNSKEDDQEED QEETLNG  ++ V+DDDNGFKTPTSLEHKIPTS+QCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GGKIKRVRQ
        GGKIKRVRQ
Subjt:  GGKIKRVRQ
XP_016902107.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo]7.90e-68100Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GGKIKRVRQ
        GGKIKRVRQ
Subjt:  GGKIKRVRQ
XP_040994038.1 cyclin-dependent protein kinase inhibitor SMR3-like isoform X2 [Juglans microcarpa x Juglans regia]6.27e-2363.64Show/hide
Query:  VQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRL-TKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVRQ
        V+DDD+GFKTPTSL++KIP  +QCP APRKPKPR + TKR+   R R+LLDLS+EI+SLFP   LV L GKIK++ +
Subjt:  VQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRL-TKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVRQ
TrEMBL top hitse value%identityAlignment
A0A0A0LY05 Uncharacterized protein1.2e-4792.66Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLLRYVNSKEDDQEED QEETLNG  ++ V+DDDNGFKTPTSLEHKIPTS+QCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GGKIKRVRQ
        GGKIKRVRQ
Subjt:  GGKIKRVRQ
A0A1S4E1K5 cyclin-dependent protein kinase inhibitor SMR3-like4.8e-52100Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GGKIKRVRQ
        GGKIKRVRQ
Subjt:  GGKIKRVRQ
A0A5A7VIY0 Cyclin-dependent protein kinase inhibitor SMR3-like4.8e-52100Show/hide
Query:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
        MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL
Subjt:  MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGL

Query:  GGKIKRVRQ
        GGKIKRVRQ
Subjt:  GGKIKRVRQ
A0A660KRH4 Uncharacterized protein2.2e-1746.88Show/hide
Query:  MEFTFLL-------------RYVNSKEDDQEEDRQEETLNGRSNSV-----VQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLL
        MEF FL+               V  +E+++EE+++++ +N  S +V     V+DD++GFKTPTSL+HKIP  +QCP APRKPK   LTKRKA  R R+LL
Subjt:  MEFTFLL-------------RYVNSKEDDQEEDRQEETLNGRSNSV-----VQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLL

Query:  DLSSEIQSLFPAEFLVGLG-GKIKRVRQ
        DLS++I++LFP   L  L  GKIK++R+
Subjt:  DLSSEIQSLFPAEFLVGLG-GKIKRVRQ
A0A7N2KPB5 Uncharacterized protein1.1e-1653.27Show/hide
Query:  KEDDQEEDRQEETLNGRSNSV----------VQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGG
        +E+ QEE+  +  ++  S  V          V+DDD+GF+TPTSL+HKIP S+QCP APRKPKP   TKRKA  R R++LDLS+EI SLFP   LV L  
Subjt:  KEDDQEEDRQEETLNGRSNSV----------VQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGG

Query:  KIKRVRQ
        KIKR+R+
Subjt:  KIKRVRQ
SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR31.2e-0442.39Show/hide
Query:  QEEDRQEETLNGRSNSVVQDDDN---------GFKTPTSLEHKIP--TSIQCPMAPRKPKPRRL--TKRKAVE---RHRLLLDLSSEIQSLF
        QEED ++  L  R    + D D+         G KTPTS +HKIP      CP APRKPKP R   TKRK       +R+ +DLS EI+  F
Subjt:  QEEDRQEETLNGRSNSVVQDDDN---------GFKTPTSLEHKIP--TSIQCPMAPRKPKPRRL--TKRKAVE---RHRLLLDLSSEIQSLF
Arabidopsis top hitse value%identityAlignment
AT5G02420.1 unknown protein8.7e-0642.39Show/hide
Query:  QEEDRQEETLNGRSNSVVQDDDN---------GFKTPTSLEHKIP--TSIQCPMAPRKPKPRRL--TKRKAVE---RHRLLLDLSSEIQSLF
        QEED ++  L  R    + D D+         G KTPTS +HKIP      CP APRKPKP R   TKRK       +R+ +DLS EI+  F
Subjt:  QEEDRQEETLNGRSNSVVQDDDN---------GFKTPTSLEHKIP--TSIQCPMAPRKPKPRRL--TKRKAVE---RHRLLLDLSSEIQSLF
AT5G59360.1 unknown protein1.3e-0429.59Show/hide
Query:  KEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKA--VERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVR
        ++ DQE +  ++   G+     +D+++  K P +  +        P  PRKPK     KR+   V+R  + LD++ E++S+FP   L   G KIK+ R
Subjt:  KEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKA--VERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCACTTTTCTTTTGAGATATGTCAATTCCAAAGAAGATGATCAAGAAGAAGATCGACAAGAGGAGACATTAAATGGAAGAAGCAACTCAGTCGTTCAAGATGA
TGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTATTCAGTGCCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGG
CCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAA
mRNA sequenceShow/hide mRNA sequence
GCCTCTATTATATATCATCACATCCAAAATTTTCTTTTCCTCAACATCTCCTCTCTCTATATCTCTCAATTTTTTTTTAAAATTAAAAAGAAAAATCCATGCACTTATAA
TTATTATTTGAATTGAAAAGGGACTCTTCGACTTCAATTCAAGTATTTTGCTCTCTGAAAATGATGTGAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAATTCC
AAAGAAGATGATCAAGAAGAAGATCGACAAGAGGAGACATTAAATGGAAGAAGCAACTCAGTCGTTCAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCA
TAAAATTCCCACAAGTATTCAGTGCCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCT
CTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAAAAGAAACTTAAAAACTTTGATCCATA
Protein sequenceShow/hide protein sequence
MEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGFKTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVRQ