CuGenDBv2

Gene ID	IVF0007004
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Replication protein A subunit
Genome location	chr02:21261946..21265456
RNA-Seq Expression	IVF0007004
Synteny	IVF0007004
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006268 - DNA unwinding involved in DNA replication (biological process) GO:0006289 - nucleotide-excision repair (biological process) GO:0007004 - telomere maintenance via telomerase (biological process) GO:0051321 - meiotic cell cycle (biological process) GO:0005662 - DNA replication factor A complex (cellular component) GO:0003684 - damaged DNA binding (molecular function) GO:0043047 - single-stranded telomeric DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR004591 - Replication factor A protein 1 IPR007199 - Replication factor-A protein 1, N-terminal IPR012340 - Nucleic acid-binding, OB-fold IPR013955 - Replication factor A, C-terminal IPR031657 - Replication protein A, OB domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6587586.1 Replication protein A 70 kDa DNA-binding subunit B, partial [Cucurbita argyrosperma subsp. sororia]

0.0

82.87

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MA+APT GGISKIL+NPSPDS +DVP VV+QV+DLKATGNRYMFTA+DGDMKLK+ILPSNLTS+VISGNIQ  GL   L   S+    ++  +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVS ALEKEVK EVKKEEA IVLKPK ELDDKS  N GSGILLKPKQELVAKSAAQIVHEQ  NMAP+ARMSMTRRV PLVYLNPY GDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFN+AARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEV++EAAFVPETK+NFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQ+VS TMSIRRKINNETAPKRDVTIADETKKTVV+SLWNDLATTVGQELLDIADQSPIIA+KYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SI INPDIKEAH LRSWYD+EGKA+S++SVSSGMSPS+KSGSRSMY+DRVSLSHI QNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVT+AI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWC++CQKNDEECSL           S E W+STFN EAERI+GC+A+ELD LKSQIGEE SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

XP_008453278.1 PREDICTED: replication protein A 70 kDa DNA-binding subunit B [Cucumis melo]

0.0

91.19

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQ  GL   L   S+    +++ +YLIV KC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
        VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFNDAARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SITINPDIKEAHDLRSWYDAEGKAVS+SSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWCDNCQKNDEECSL           SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

XP_011648462.1 replication protein A 70 kDa DNA-binding subunit B [Cucumis sativus]

0.0

88.25

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MASAPTAGGISK+LSNPSPDSP+DVPDVVVQVIDLKATGNRYMFTASDG MKLKAILPSNLTSDVISGNIQ  GL   L   S+    +++ +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVSPALEKEVKTEVK EEAG +LKPKVELDDKS FNNGSGI+LKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFNDAARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEVS+EAAFVPETKYNFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIA+KYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SITINPDIKEAHDLRSWYD+EGKAVS+SSVSSG+SPSTKSGSRSMYSDR+SLSHI +NKSLGEEKP FFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWCDNCQKNDEECSL           SGE WVSTFNEEAERI+GCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

XP_022971740.1 replication protein A 70 kDa DNA-binding subunit B [Cucurbita maxima]

0.0

82.54

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MA+APT GGISKIL+NPSPDS +DVP VV+QV+DLKATGNRYMFTA+DGDMKLK+ILPSNLTS+VISGNIQ  GL   L   S+    ++  +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVS AL+KEVK+EVKKEEA IVLKPK ELDDKS  N GSGILLKPKQELVAKSAAQIVHEQR NMAP+ARMSMTRRV PLVYLNPY GDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFN+AARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEV++EAAFVPETK+NFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGR+LVDVIGVVQ+VS TMSIRRKINNETAPKRDVTIADETKKTVV+SLWNDLATTVGQELLDI DQSPIIA+KYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SI INPDIKEAH LRSWYD+EGKA+S++SVSSGMSPS+KSGSRSMY+DRVSLSHI QNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVT+AI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWC++CQKNDEECSL           S E W+STFN EAERI+GC+A+ELD LKSQIGEE SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

XP_038878718.1 replication protein A 70 kDa DNA-binding subunit B-like [Benincasa hispida]

0.0

86.62

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MA APT GGIS ILSNPSPDSP+DVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQ  GL   L   S+    ++  +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVSPALEKEVKTEVKKEE GI+LKPK+E DDKS FNNGSGILLKPKQELVAKSAAQIVHEQ+ NMAPAARMSMTRRV PLVYLNPY GDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEG VFNV      GTQIQATMFNDAARKFYEK           G LKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQ+VS TMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SI INPDIKEAHDLRSWYD+EGKAVS+SSVSSG+SPSTKSG+RSMYSDR+SLSHI QNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTC KKVTEAI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWCDNCQKNDEECSL           SGE W STFNEEAERIIGCSADELDQLKSQ+GEENSYQLKLK+ATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSG2 Replication protein A subunit

3.2e-296

88.25

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MASAPTAGGISK+LSNPSPDSP+DVPDVVVQVIDLKATGNRYMFTASDG MKLKAILPSNLTSDVISGNIQ  GL   L   S+    +++ +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVSPALEKEVKTEVK EEAG +LKPKVELDDKS FNNGSGI+LKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFNDAARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEVS+EAAFVPETKYNFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIA+KYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SITINPDIKEAHDLRSWYD+EGKAVS+SSVSSG+SPSTKSGSRSMYSDR+SLSHI +NKSLGEEKP FFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWCDNCQKNDEECSL           SGE WVSTFNEEAERI+GCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

A0A1S3BX02 Replication protein A subunit

1.1e-304

91.19

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQ  GL   L   S+    +++ +YLIV KC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
        VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFNDAARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SITINPDIKEAHDLRSWYDAEGKAVS+SSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWCDNCQKNDEECSL           SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

A0A5A7UTE7 Replication protein A subunit

1.1e-304

91.19

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQ  GL   L   S+    +++ +YLIV KC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
        VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFNDAARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SITINPDIKEAHDLRSWYDAEGKAVS+SSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWCDNCQKNDEECSL           SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

A0A6J1F085 Replication protein A subunit

3.7e-276

82.54

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MA+APT GGISKIL+NPSPDS +DVP VV+QV+DLKATGNRYMFTA+DGDMKLK+ILPSNLTS+VISGNIQ  GL   L   S+    ++  +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVS ALEKEVK EVKKEEA IVLKPK ELDDKS  N GSGILLKPKQELVAKSAAQIVHEQ  NMAP+ARMSMTRRV PLVYLNPY GDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFN+AARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEV++EAAFVPETK+NFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGRDLVDV+GVVQ+VS TMSIRRKINNETAPKRDVTIADETKKTVV+SLWNDLATTVGQELLDI DQSPIIA+KYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SI INPDIKEAH LRSWYD+EGKA+S++SVSSGMSPS+KSGSRSMY+DRVSLSHI QNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVT+AI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWC++CQKNDEECSL           S E W+STFN EAERI+GC+A+ELD LKSQIGEE SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

A0A6J1I6K6 Replication protein A subunit

1.7e-276

82.54

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        MA+APT GGISKIL+NPSPDS +DVP VV+QV+DLKATGNRYMFTA+DGDMKLK+ILPSNLTS+VISGNIQ  GL   L   S+    ++  +YLIVTKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
         VVS AL+KEVK+EVKKEEA IVLKPK ELDDKS  N GSGILLKPKQELVAKSAAQIVHEQR NMAP+ARMSMTRRV PLVYLNPY GDWTIKVRVTDK
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        GNLRTYKNAQGEGCVFNV      GTQIQATMFN+AARKFYEK           GTLKVANKKFKTVQNDYEMTLNVNSQVDEV++EAAFVPETK+NFVK
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYEK-----------GTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        IDMLGPHVNGR+LVDVIGVVQ+VS TMSIRRKINNETAPKRDVTIADETKKTVV+SLWNDLATTVGQELLDI DQSPIIA+KYLRVGDFQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        SI INPDIKEAH LRSWYD+EGKA+S++SVSSGMSPS+KSGSRSMY+DRVSLSHI QNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVT+AI
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
        GSGYWC++CQKNDEECSL           S E W+STFN EAERI+GC+A+ELD LKSQIGEE SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVDLLLSPDF
        SVAPVD      F
Subjt:  SVAPVDLLLSPDF

SwissProt top hits

e value

%identity

Alignment

Q10Q08 Replication protein A 70 kDa DNA-binding subunit B

3.3e-197

60.29

Show/hide

Query:  ASAPTAGGISKILSNPSPDSPT--DVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTK
        A + T G ++ +L N SPD+ T   VP++V+QV+DLK  G R+ F ASDG  K+K +L + L  +V SGNIQ  G+   L          Q  + LI+TK
Subjt:  ASAPTAGGISKILSNPSPDSPT--DVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTK

Query:  CVVVSPALEKEVKTEVKKEE--AGIVLKPKVELDDKSKFNNG---SGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIK
          VV  AL+ E+K E +K+E    I+L PK E    SK  N      ++LKPKQE+  KSA+QIV+EQR N APAAR++MTRRV PL+ LNPY G+W IK
Subjt:  CVVVSPALEKEVKTEVKKEE--AGIVLKPKVELDDKSKFNNG---SGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIK

Query:  VRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFY-----------EKGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPET
        VRVT KGNLRTYKNA+GEGCVFNV      GTQIQATMFN+AA+KFY            KG+L+VANK+FKTV NDYEMTLN N+ V+E   E  F+P+ 
Subjt:  VRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFY-----------EKGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPET

Query:  KYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSL
        +YNFVKID LGP+V GR+LVDVIGVVQ+VS T+S+RRKI+NET PKRD+ +AD++ KTV ISLWNDLATT GQELLD+ D +PIIA+K L+V DFQG+SL
Subjt:  KYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSL

Query:  STISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNK
        ST+ RS+I +NPD+ EA  LR+WYD+EGK  S++S+ S M  S   G+RSMYSDRV LSHI  + +LG++KP+FFS+ AY+S IKPDQTMWYRACKTCNK
Subjt:  STISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNK

Query:  KVTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKR
        KVTEAIGSGYWC+ CQKND ECSL           +GE W+S FN++AERI+GCSADELD+++ + G++ SY LKLKEATWVPHLFRVSV+QNEY NEKR
Subjt:  KVTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKR

Query:  QRITVRSVAPVD
        QRITVRS APVD
Subjt:  QRITVRSVAPVD

Q6YZ49 Replication protein A 70 kDa DNA-binding subunit A

1.8e-57

32.22

Show/hide

Query:  NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKF
        N APA       R+ P+  LNPY G W IK RVT KG++R Y NA+G+G VF+       G +I+ T FN    +FYE           +G L+ A K +
Subjt:  NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKF

Query:  KTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATT
          + N++E+ L   S VD    E + +P  +++F  I+ +    N   ++D+IGVV +V+   +I+RK   ET  KR + + D + ++V +++W D    
Subjt:  KTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATT

Query:  VGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLG
         G +L  + ++   P++AVK  +V DF G S+ TIS + + INPD  EAH LR W+D+ G+  S  S+S  ++P       S    R +++ I       
Subjt:  VGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLG

Query:  EEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQL
         +KP + +++A V F K +++ +Y AC      + CNKKVT++    + CD C +  EEC             SG  WV+ F E  + ++GCSA EL+ L
Subjt:  EEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQL

Query:  KSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVD
        K +  E+  +   +    +  +L R+ V +  Y +E++ + T   V  VD
Subjt:  KSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVD

Q9FME0 Replication protein A 70 kDa DNA-binding subunit D

1.2e-207

62.03

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLT-TLSMIFRTSQTSEYLIVTK
        M ++ T   IS +LSNPS DS +D  ++VVQV+DLK  GNRY F+A+DG  K+KA+  ++LT ++ISG IQ  GL   +  T++ I  +S++++Y +VTK
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLT-TLSMIFRTSQTSEYLIVTK

Query:  CVVVSPALEKEVKTEVK--KEEAGIVLKPKVELDDKSKFNN--GSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKV
        C  V   L+ E+  + K  +EEA    K K+E    S  N+   +GI LKPKQE VAKSA+QI+ EQR N APAARM+MTRRV PLV LNPY G+WTIKV
Subjt:  CVVVSPALEKEVKTEVK--KEEAGIVLKPKVELDDKSKFNN--GSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKV

Query:  RVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETK
        RVT+KG +R YKNA+GEGCVFNV      GTQIQATMFNDAARKF++           +G+LK+ANK+FKTVQNDYEMTLN NS+V+E SSE  F+PETK
Subjt:  RVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETK

Query:  YNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLS
        +NFV I+ LG +VN ++L+D+IGVVQ+VS TMSIRR+ +NE  PKRD+T+ADE++KTVV+SLWNDLAT +GQELLD+ADQSP+IA+K L+VGDFQGVSLS
Subjt:  YNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLS

Query:  TISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKK
        TISRS++ INP+  EA  L+SW+D+EGK +S+SS+ SGMSPS K+GSRS+Y+DRV LSHI  N SL EEKP+FFS RAY+SFIKPDQTMWY+ACKTCNKK
Subjt:  TISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKK

Query:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ
        VTEA+ SGYWC+ CQ+  EECSL           SGE W+S+FN+EAE+I+GCSADEL++LKS+ GE N YQ KLKEATW  H+FRVSV+QNEYN EKRQ
Subjt:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ

Query:  RITVRSVAPVD
        R+TV+ VAP+D
Subjt:  RITVRSVAPVD

Q9SD82 Replication protein A 70 kDa DNA-binding subunit B

1.1e-208

62.38

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        M ++ T  GI+ +L+N S DS +  P++VVQV+DLK  GNRY F+A+DG MK+KA+LP+ LTSD+ISG IQ  GL   L             +Y+++TKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
          V+ AL+ E+K E+K                       +GI+LKPK E VAKSA+QI++EQR N APAARM+MTRRV PLV LNPY G WTIKVRVT+K
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        G +RTYKNA+GEGCVFNV      GTQIQATMFN AARKFY+           +G+LK+ANK+FKTVQNDYEMTLN NS+V+E S+E  F PETK+NFV 
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        ID LG +VN +DL+DVIGVVQ+VS TMSIRRK +NE  PKRD+T+ADETKKTVV+SLWNDLAT +GQELLD+AD  P+IA+K L+VG FQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        ++ INP+  EA  L+SWYDAEGK  S+S++ SGMS S  +GSRSMYSDRV LSHI  N SLGEEKP+FFS RAY+SFIKPDQTMWYRACKTCNKKVTEA+
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
         SGYWC++CQK D+ECSL           +GE W+S FN+EAE+IIGC+AD+L+ LKS+ GE N +Q KLKEATW  HLFR+SVSQ EYN+EKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVD
         V+P+D
Subjt:  SVAPVD

Q9SKI4 Replication protein A 70 kDa DNA-binding subunit A

4.2e-59

28.15

Show/hide

Query:  VVQVIDLKATG-------NRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQ-----TSEYLIVTKCVVVSPALEKEVKTEVK
        ++QV+++K  G        RY F  SDG     A++   L   V SG  +   +   +  +    +  +       E ++     + +P +  E  TE +
Subjt:  VVQVIDLKATG-------NRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQ-----TSEYLIVTKCVVVSPALEKEVKTEVK

Query:  KEEAG----------IVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHE---QRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNL
        K  +G          +  +P V+         G  I  +       + + Q  ++      N  P  +     RV P+  LNPY G W IK RVT KG++
Subjt:  KEEAG----------IVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHE---QRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNL

Query:  RTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDM
        R Y NA+G+G VF+       G +I+ T FN    +FY+           KG+LK A K F  ++N++E+ L   S V+    E   +P+ +++F  I  
Subjt:  RTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDM

Query:  LGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSS
        +  +     ++DVIGVV +V+ ++ I RK   ET  +R + + DE+ K V ++LW +     G++L ++ D +  P++A+K  +V DF G S+ TIS + 
Subjt:  LGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSS

Query:  ITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKK
        + INPD  EAH LR+W+D  GK     + S  +S  T  G  S    R ++S I +      +KP + +++A +SFIK D +  Y AC      K CNKK
Subjt:  ITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKK

Query:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ
        VT +  + + CD C +  +EC             +G  W++ F E  E I+GC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E+R 
Subjt:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ

Query:  RITVRSVAPVD
        ++TV  V  V+
Subjt:  RITVRSVAPVD

Arabidopsis top hits

e value

%identity

Alignment

AT2G06510.1 replication protein A 1A

3.0e-60

28.15

Show/hide

Query:  VVQVIDLKATG-------NRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQ-----TSEYLIVTKCVVVSPALEKEVKTEVK
        ++QV+++K  G        RY F  SDG     A++   L   V SG  +   +   +  +    +  +       E ++     + +P +  E  TE +
Subjt:  VVQVIDLKATG-------NRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQ-----TSEYLIVTKCVVVSPALEKEVKTEVK

Query:  KEEAG----------IVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHE---QRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNL
        K  +G          +  +P V+         G  I  +       + + Q  ++      N  P  +     RV P+  LNPY G W IK RVT KG++
Subjt:  KEEAG----------IVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHE---QRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNL

Query:  RTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDM
        R Y NA+G+G VF+       G +I+ T FN    +FY+           KG+LK A K F  ++N++E+ L   S V+    E   +P+ +++F  I  
Subjt:  RTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDM

Query:  LGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSS
        +  +     ++DVIGVV +V+ ++ I RK   ET  +R + + DE+ K V ++LW +     G++L ++ D +  P++A+K  +V DF G S+ TIS + 
Subjt:  LGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSS

Query:  ITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKK
        + INPD  EAH LR+W+D  GK     + S  +S  T  G  S    R ++S I +      +KP + +++A +SFIK D +  Y AC      K CNKK
Subjt:  ITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKK

Query:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ
        VT +  + + CD C +  +EC             +G  W++ F E  E I+GC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E+R 
Subjt:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ

Query:  RITVRSVAPVD
        ++TV  V  V+
Subjt:  RITVRSVAPVD

AT2G06510.2 replication protein A 1A

7.9e-61

32.22

Show/hide

Query:  NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKF
        N  P  +     RV P+  LNPY G W IK RVT KG++R Y NA+G+G VF+       G +I+ T FN    +FY+           KG+LK A K F
Subjt:  NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKF

Query:  KTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATT
          ++N++E+ L   S V+    E   +P+ +++F  I  +  +     ++DVIGVV +V+ ++ I RK   ET  +R + + DE+ K V ++LW +    
Subjt:  KTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATT

Query:  VGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLG
         G++L ++ D +  P++A+K  +V DF G S+ TIS + + INPD  EAH LR+W+D  GK     + S  +S  T  G  S    R ++S I +     
Subjt:  VGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLG

Query:  EEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQL
         +KP + +++A +SFIK D +  Y AC      K CNKKVT +  + + CD C +  +EC             +G  W++ F E  E I+GC A +L  +
Subjt:  EEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQL

Query:  KSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVD
        K ++ +E  +   +++  +  ++ ++ + +  Y +E+R ++TV  V  V+
Subjt:  KSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVD

AT4G19130.1 Replication factor-A protein 1-related

3.1e-57

32.21

Show/hide

Query:  NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKF
        N  P AR     ++ P+  L+PY G WTIK RVT+K  L+ Y N +GEG VFN       G +I+ T FN  A +FY+           +G+L+ A K F
Subjt:  NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKF

Query:  KTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATT
          ++NDYE+ L+  S + +   E A +P  +++F  I  +   +    +VDVIG+V ++S T++I RK N    PKR + + D + ++V +++W D    
Subjt:  KTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATT

Query:  VGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLG
         GQ L  + D    P++AVK  R+ +F G ++STI  S + I+PD  EA  L++W++ EGK+V   S+S   S S K   R       ++S I   K   
Subjt:  VGQELLDIADQS--PIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLG

Query:  EEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYW-CDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQ
         EKP + ++ A + ++K D    Y AC      + C+KKVT+  G G W C+ C K+ +EC             +    V+ F E  E I+G SA +L  
Subjt:  EEKPMFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYW-CDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQ

Query:  LKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSV
        +K++  +E  ++  +++  +  + F++ V +  +++E+R + TV  V
Subjt:  LKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSV

AT5G08020.1 RPA70-kDa subunit B

7.8e-210

62.38

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC
        M ++ T  GI+ +L+N S DS +  P++VVQV+DLK  GNRY F+A+DG MK+KA+LP+ LTSD+ISG IQ  GL   L             +Y+++TKC
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKC

Query:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK
          V+ AL+ E+K E+K                       +GI+LKPK E VAKSA+QI++EQR N APAARM+MTRRV PLV LNPY G WTIKVRVT+K
Subjt:  VVVSPALEKEVKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDK

Query:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK
        G +RTYKNA+GEGCVFNV      GTQIQATMFN AARKFY+           +G+LK+ANK+FKTVQNDYEMTLN NS+V+E S+E  F PETK+NFV 
Subjt:  GNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK

Query:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS
        ID LG +VN +DL+DVIGVVQ+VS TMSIRRK +NE  PKRD+T+ADETKKTVV+SLWNDLAT +GQELLD+AD  P+IA+K L+VG FQGVSLSTISRS
Subjt:  IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRS

Query:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI
        ++ INP+  EA  L+SWYDAEGK  S+S++ SGMS S  +GSRSMYSDRV LSHI  N SLGEEKP+FFS RAY+SFIKPDQTMWYRACKTCNKKVTEA+
Subjt:  SITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAI

Query:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR
         SGYWC++CQK D+ECSL           +GE W+S FN+EAE+IIGC+AD+L+ LKS+ GE N +Q KLKEATW  HLFR+SVSQ EYN+EKRQRITVR
Subjt:  GSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR

Query:  SVAPVD
         V+P+D
Subjt:  SVAPVD

AT5G61000.1 Replication factor-A protein 1-related

8.6e-209

62.03

Show/hide

Query:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLT-TLSMIFRTSQTSEYLIVTK
        M ++ T   IS +LSNPS DS +D  ++VVQV+DLK  GNRY F+A+DG  K+KA+  ++LT ++ISG IQ  GL   +  T++ I  +S++++Y +VTK
Subjt:  MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLT-TLSMIFRTSQTSEYLIVTK

Query:  CVVVSPALEKEVKTEVK--KEEAGIVLKPKVELDDKSKFNN--GSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKV
        C  V   L+ E+  + K  +EEA    K K+E    S  N+   +GI LKPKQE VAKSA+QI+ EQR N APAARM+MTRRV PLV LNPY G+WTIKV
Subjt:  CVVVSPALEKEVKTEVK--KEEAGIVLKPKVELDDKSKFNN--GSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKV

Query:  RVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETK
        RVT+KG +R YKNA+GEGCVFNV      GTQIQATMFNDAARKF++           +G+LK+ANK+FKTVQNDYEMTLN NS+V+E SSE  F+PETK
Subjt:  RVTDKGNLRTYKNAQGEGCVFNV------GTQIQATMFNDAARKFYE-----------KGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETK

Query:  YNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLS
        +NFV I+ LG +VN ++L+D+IGVVQ+VS TMSIRR+ +NE  PKRD+T+ADE++KTVV+SLWNDLAT +GQELLD+ADQSP+IA+K L+VGDFQGVSLS
Subjt:  YNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLS

Query:  TISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKK
        TISRS++ INP+  EA  L+SW+D+EGK +S+SS+ SGMSPS K+GSRS+Y+DRV LSHI  N SL EEKP+FFS RAY+SFIKPDQTMWY+ACKTCNKK
Subjt:  TISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKK

Query:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ
        VTEA+ SGYWC+ CQ+  EECSL           SGE W+S+FN+EAE+I+GCSADEL++LKS+ GE N YQ KLKEATW  H+FRVSV+QNEYN EKRQ
Subjt:  VTEAIGSGYWCDNCQKNDEECSL-----------SGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ

Query:  RITVRSVAPVD
        R+TV+ VAP+D
Subjt:  RITVRSVAPVD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAGCGCACCAACTGCTGGCGGAATATCAAAGATTTTGTCAAATCCATCACCGGACTCTCCCACCGATGTCCCCGACGTTGTGGTTCAGGTCATTGATCTCAAGGC
GACGGGAAATCGCTACATGTTTACTGCTAGCGATGGCGACATGAAGCTTAAAGCCATTCTTCCATCAAATCTGACTTCTGACGTCATTTCTGGAAACATTCAAATTTGGG
GCTTATTCGCATTCTTGACTACTCTCTCAATGATATTCCGAACAAGTCAGACAAGTGAGTATTTAATAGTGACAAAATGTGTGGTGGTTTCTCCTGCTCTAGAAAAGGAG
GTAAAAACTGAGGTTAAGAAAGAGGAAGCGGGCATTGTTTTGAAACCGAAGGTAGAGCTCGACGATAAGAGCAAATTTAACAATGGATCTGGTATTCTTCTGAAACCAAA
GCAAGAATTGGTTGCCAAATCAGCTGCTCAGATTGTACATGAGCAGCGTATGAATATGGCACCAGCTGCCCGGATGTCCATGACAAGGCGAGTTCAGCCCCTTGTCTACT
TAAACCCTTACCTGGGAGATTGGACCATCAAAGTTCGTGTTACTGATAAAGGAAACCTGCGTACATACAAGAATGCTCAAGGAGAAGGTTGTGTTTTCAATGTAGGTACA
CAAATACAGGCAACAATGTTCAATGATGCTGCAAGGAAGTTCTATGAGAAGGGAACTTTGAAAGTTGCCAATAAGAAATTTAAGACTGTTCAAAATGATTATGAAATGAC
TTTGAATGTGAATTCTCAAGTAGACGAGGTCAGCAGTGAAGCTGCTTTTGTTCCTGAAACAAAATATAATTTTGTCAAGATTGATATGTTAGGTCCTCACGTGAATGGAA
GAGATCTTGTTGATGTAATTGGAGTTGTTCAAAATGTTTCTTCTACAATGAGCATTCGAAGGAAAATCAACAATGAGACAGCTCCAAAACGTGATGTAACCATTGCTGAT
GAAACGAAGAAGACAGTTGTGATATCTTTGTGGAATGATCTTGCCACCACTGTAGGGCAGGAGTTGCTTGACATTGCCGACCAATCTCCCATAATTGCAGTGAAATATCT
TAGAGTTGGAGACTTTCAAGGTGTATCTTTGTCGACAATAAGCAGGAGCTCAATTACAATTAACCCTGACATAAAGGAAGCACATGATTTGAGATCATGGTATGACGCTG
AAGGTAAAGCCGTATCCTTGTCTTCTGTAAGCTCCGGCATGAGCCCATCAACTAAGAGCGGTTCTAGGTCCATGTACTCTGACCGGGTTTCCTTATCTCATATAAACCAA
AACAAATCTTTGGGAGAAGAAAAGCCAATGTTCTTCAGCATTAGAGCATATGTCAGCTTTATCAAACCTGATCAAACAATGTGGTATCGTGCTTGCAAAACATGCAACAA
GAAGGTAACTGAAGCCATCGGATCTGGCTATTGGTGCGACAATTGCCAGAAAAACGATGAAGAATGCAGTTTAAGTGGTGAAGTTTGGGTCTCTACATTCAACGAAGAAG
CAGAGAGAATCATTGGATGCTCTGCTGATGAACTTGATCAGCTCAAATCGCAGATTGGTGAGGAGAATTCATATCAACTTAAACTCAAAGAAGCCACATGGGTTCCCCAC
TTATTTCGAGTTAGCGTTTCGCAGAACGAATACAACAATGAGAAGAGACAAAGGATCACCGTCAGGTCAGTTGCTCCAGTCGATTTGCTGCTGAGTCCAGATTTTTGCTA
G

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSNLTSDVISGNIQIWGLFAFLTTLSMIFRTSQTSEYLIVTKCVVVSPALEKE
VKTEVKKEEAGIVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVGT
QIQATMFNDAARKFYEKGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIAD
ETKKTVVISLWNDLATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAEGKAVSLSSVSSGMSPSTKSGSRSMYSDRVSLSHINQ
NKSLGEEKPMFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLSGEVWVSTFNEEAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPH
LFRVSVSQNEYNNEKRQRITVRSVAPVDLLLSPDFC

IVF0007004 (gene) of Melon (IVF77) v1 genome