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IVF0007008 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007008
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr03:14184552..14184854
RNA-Seq ExpressionIVF0007008
SyntenyIVF0007008
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049658.1 uncharacterized protein E6C27_scaffold163G001290 [Cucumis melo var. makuwa]1.11e-4397.33Show/hide
Query:  MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKM
        MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVL K+
Subjt:  MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKM

KAA0067858.1 uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa]2.55e-2963.54Show/hide
Query:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG
        + +SF  P     +DLG  LCDLGASINLMP  IFKKLEI ++Q  HMRLQF DRSIA  E +IED+LVK+DKFLF  +F+ILDY+AN+EV II G
Subjt:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG

TYK11062.1 uncharacterized protein E5676_scaffold73G00470 [Cucumis melo var. makuwa]8.46e-3062.5Show/hide
Query:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG
        + +SF  P     +DLG  LCDLGASINLMP  IFKKLEI ++Q  HMRLQF DRSIA    +IED+LVK+DKFLF  +F+ILDY+AN+EV II G
Subjt:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]2.66e-3163.54Show/hide
Query:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG
        + +SF  P     +DLG  LCDLGASINLMP  IFKKLEI ++Q  HMRLQF DRSIA  E +IED+LVK+DKFLF  +F+ILDY+AN+EV II G
Subjt:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]4.64e-2970.67Show/hide
Query:  LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKAN
        +DLGC L DLGASINLMP +IFKKLE+G++Q THMRLQFADRSI   +D IED+L K+DKFLF  +FVIL+Y+AN
Subjt:  LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKAN

TrEMBL top hitse value%identityAlignment
A0A1S3CN55 uncharacterized protein LOC1035028051.9e-2363.54Show/hide
Query:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG
        + +SF  P     +DLG  LCDLGASINLMP  IFKKLEI ++Q  HMRLQF DRSIA  E +IED+LVK+DKFLF  +F+ILDY+AN+EV II G
Subjt:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG

A0A1S4E2V6 uncharacterized protein LOC1079917231.4e-2170.67Show/hide
Query:  LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKAN
        +DLGC L DLGASINLMP +IFKKLE+G++Q THMRLQFADRSI   +D IED+L K+DKFLF  +FVIL+Y+AN
Subjt:  LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKAN

A0A5A7VJ95 Uncharacterized protein1.9e-2363.54Show/hide
Query:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG
        + +SF  P     +DLG  LCDLGASINLMP  IFKKLEI ++Q  HMRLQF DRSIA  E +IED+LVK+DKFLF  +F+ILDY+AN+EV II G
Subjt:  ELQSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG

A0A5D3CID6 Uncharacterized protein2.1e-2263.83Show/hide
Query:  QSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG
        +SF  P     +DLG  LCDLGASINLMP  IFKKLEI ++Q  HMRLQF DRSIA    +IED+LVK+DKFLF  +F+ILDY+AN+EV II G
Subjt:  QSFVAP-----LDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG

A0A5D3D677 Uncharacterized protein3.5e-3397.33Show/hide
Query:  MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKM
        MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVL K+
Subjt:  MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGAAGCGTCTCATTCGGCGACGAACTCCAATCTTTTGTCGCTCCACTTGATTTAGGTTGTGCTCTATGCGACCTTGGGGCGAGCATCAATTTGATGCCTCACTT
TATCTTCAAAAAATTAGAGATAGGGGACATCCAACAAACTCATATGAGACTCCAATTCGCTGACAGGTCCATTGCTTGCCAAGAGGACGAGATTGAAGATGTTTTGGTAA
AGATGGACAAGTTTTTGTTCCCTACAAACTTCGTTATTCTTGATTACAAAGCTAATCGGGAGGTTCTAATTATTTTGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCGAAGCGTCTCATTCGGCGACGAACTCCAATCTTTTGTCGCTCCACTTGATTTAGGTTGTGCTCTATGCGACCTTGGGGCGAGCATCAATTTGATGCCTCACTT
TATCTTCAAAAAATTAGAGATAGGGGACATCCAACAAACTCATATGAGACTCCAATTCGCTGACAGGTCCATTGCTTGCCAAGAGGACGAGATTGAAGATGTTTTGGTAA
AGATGGACAAGTTTTTGTTCCCTACAAACTTCGTTATTCTTGATTACAAAGCTAATCGGGAGGTTCTAATTATTTTGGGGTGA
Protein sequenceShow/hide protein sequence
MQRSVSFGDELQSFVAPLDLGCALCDLGASINLMPHFIFKKLEIGDIQQTHMRLQFADRSIACQEDEIEDVLVKMDKFLFPTNFVILDYKANREVLIILG