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IVF0007039 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007039
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr10:18520311..18520718
RNA-Seq ExpressionIVF0007039
SyntenyIVF0007039
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051847.1 gag/pol protein [Cucumis melo var. makuwa]2.01e-6476.3Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLA +KLNGNNYASWKNTINTVL IDDL FV VE+CPQVP ANATRTVREA+E  ++  +   AYIL SLS+VL KKHESMLT REIMDSLQEMF Q  Y
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
KAA0056449.1 gag/pol protein [Cucumis melo var. makuwa]5.35e-81100Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREH
        QIKHDTLKYIYNTRMNEGSPVREH
Subjt:  QIKHDTLKYIYNTRMNEGSPVREH
TYK07761.1 gag/pol protein [Cucumis melo var. makuwa]6.93e-6677.78Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQEMF Q  Y
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
XP_008454857.1 PREDICTED: uncharacterized protein LOC103495164 [Cucumis melo]5.08e-92100Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
XP_008464721.1 PREDICTED: uncharacterized protein LOC103502537 [Cucumis melo]1.94e-6476.3Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLA +KLNGNNYASWKNTINTVL IDDL FV VE+CPQVP ANATRTVREA+E  ++  +   AYIL SLS+VL KKHESMLT REIMDSLQEMF Q  Y
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
TrEMBL top hitse value%identityAlignment
A0A1S3BZI9 uncharacterized protein LOC1034951642.4e-69100Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
A0A5A7SMH8 Gag/pol protein9.4e-5077.78Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQEMF Q  Y
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
A0A5A7UF91 Gag/pol protein9.4e-5078.36Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  K   AYIL SLSEVL KKHESMLTAREIMDSLQEMF Q  Y
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNM
        QIKHD LKYIYN RMNEG+ VREHVLNMM++FN+
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNM
A0A5D3CPJ6 Gag/pol protein9.4e-5077.78Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLA +KLNGNNYASWKNTINTVL IDDLRFV VE+CPQVP ANATRTVRE +E  ++  +   AYIL SLSEVL KKHESMLTAREIMDSLQEMF Q  Y
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
        QIKHD LKYIYN RMNEG+ VREHVLNMM++FN+A
Subjt:  QIKHDTLKYIYNTRMNEGSPVREHVLNMMIYFNMA
A0A5D3E0T2 Gag/pol protein4.4e-63100Show/hide
Query:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
        MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY
Subjt:  MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFY

Query:  QIKHDTLKYIYNTRMNEGSPVREH
        QIKHDTLKYIYNTRMNEGSPVREH
Subjt:  QIKHDTLKYIYNTRMNEGSPVREH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCTACTAATAAACTTAATGGTAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAACCATCGATGACCTGCGATTTGTCCAAGTTGAGAAGTGTCC
TCAAGTCCCAATAGCTAATGCAACTCGAACTGTTCGAGAAGCACATGAGTGTCGGTCAAGGCAAATGAAAAATCCTAGCGCATACATTCTGCCAAGCTTATCTGAAGTAT
TGACCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATCATGGACTCTTTGCAGGAGATGTTTCGTCAGACCTTTTATCAGATCAAGCATGATACTCTAAAATACATT
TATAATACTCGTATGAACGAGGGATCTCCAGTCCGAGAACATGTTCTTAATATGATGATTTATTTCAACATGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCTACTAATAAACTTAATGGTAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAACCATCGATGACCTGCGATTTGTCCAAGTTGAGAAGTGTCC
TCAAGTCCCAATAGCTAATGCAACTCGAACTGTTCGAGAAGCACATGAGTGTCGGTCAAGGCAAATGAAAAATCCTAGCGCATACATTCTGCCAAGCTTATCTGAAGTAT
TGACCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATCATGGACTCTTTGCAGGAGATGTTTCGTCAGACCTTTTATCAGATCAAGCATGATACTCTAAAATACATT
TATAATACTCGTATGAACGAGGGATCTCCAGTCCGAGAACATGTTCTTAATATGATGATTTATTTCAACATGGCATAA
Protein sequenceShow/hide protein sequence
MLATNKLNGNNYASWKNTINTVLTIDDLRFVQVEKCPQVPIANATRTVREAHECRSRQMKNPSAYILPSLSEVLTKKHESMLTAREIMDSLQEMFRQTFYQIKHDTLKYI
YNTRMNEGSPVREHVLNMMIYFNMA