CuGenDBv2

Gene ID	IVF0007057
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Alpha-amylase
Genome location	chr08:7438192..7439715
RNA-Seq Expression	IVF0007057
Synteny	IVF0007057
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143327.1 uncharacterized protein LOC101214488 [Cucumis sativus]

2.49e-134

95.02

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQF R+PNVNSRPCV S MPSHNPSLVFFASNTR+RQIS FSQ SGPCHRI  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_008462584.1 PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo]

5.07e-143

100

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_022962862.1 uncharacterized protein LOC111463229 [Cucurbita moschata]

2.95e-103

78.11

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M  I++ST    RH  VNSRP +LS M SH PSLVF   NTR RQ S  S  S PC R  NL PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]

1.20e-102

78.11

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M AI++ST    RH  VNSRP +LS M SH PSLVF   NTR RQ S  S  S PC R  +L PKSS+EN DI PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_038881940.1 uncharacterized protein LOC120073272 [Benincasa hispida]

4.91e-118

87.06

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M+AIS+ST QF  +  VNSRPC+LSPM SH PSLVF A NTRHRQIS FSQ S PC R + LVPKSSDEN DIVPSEDDPEDGVSLGTMKLP D DIARF
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATA+T+PIFRAIRNGRL+DQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFD4 Uncharacterized protein

9.9e-104

95.02

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQF R+PNVNSRPCV S MPSHNPSLVFFASNTR+RQIS FSQ SGPCHRI  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A1S3CH91 uncharacterized protein LOC103500909

2.4e-110

100

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A5A7SHD0 Uncharacterized protein

2.4e-110

100

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A6J1HDQ9 uncharacterized protein LOC111463229

4.5e-80

78.11

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M  I++ST    RH  VNSRP +LS M SH PSLVF   NTR RQ S  S  S PC R  NL PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A6J1I6G0 uncharacterized protein LOC111471157

1.3e-79

78.11

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Query:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M AI++ST    RH  VNSRP +LS M SH PSLVF   NTR RQ S  S  S PC R  +L PKSS+EN DI PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G36145.1 unknown protein

3.2e-46

65.52

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Query:  RISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFP
        ++   +  ++   N  V +E+  EDGVSLGTMKLP+DTD+ARF+ LLFQWANSLCQGANLPLPVPLKVD+I  G RLGFI + D GKT+V VYIDCLVF 
Subjt:  RISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFP

Query:  ATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV
         T     +F+A RNGR KD++PPGE RIMRSLLGALKK+VEI+RV
Subjt:  ATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV

Sequences

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CDS sequence

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ATGGACGCCATTTCTTATTCAACAAACCAATTCTTTCGTCACCCAAATGTCAATTCTCGCCCATGTGTTCTCTCTCCAATGCCGTCTCATAATCCGTCACTGGTTTTCTT
CGCTTCGAACACGCGGCATCGCCAAATCTCCACTTTCTCCCAATTCTCAGGTCCATGCCACAGGATTTCCAATCTGGTGCCCAAGTCTTCGGATGAGAACAACGACATTG
TGCCCTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCTAGGTTTCAGGTCTTACTCTTTCAATGGGCCAATAGT
CTTTGCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGACGGAAAGACAGAAGTTCT
CGTGTATATAGATTGCTTGGTTTTCCCTGCTACTGCCAGTACTAGTCCAATTTTTCGGGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAA
TTATGAGGAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGA

mRNA sequence

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CGTCAAACCCATAGCTGAAACACTATCTTCTCCTAATTTCCAATCATCTTCCTTATCTTTCTCTCAGCTCCTTTTCCCTGTTGCTTCTTCGTAATCAAATCCATCAATGG
ACGCCATTTCTTATTCAACAAACCAATTCTTTCGTCACCCAAATGTCAATTCTCGCCCATGTGTTCTCTCTCCAATGCCGTCTCATAATCCGTCACTGGTTTTCTTCGCT
TCGAACACGCGGCATCGCCAAATCTCCACTTTCTCCCAATTCTCAGGTCCATGCCACAGGATTTCCAATCTGGTGCCCAAGTCTTCGGATGAGAACAACGACATTGTGCC
CTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCTAGGTTTCAGGTCTTACTCTTTCAATGGGCCAATAGTCTTT
GCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGACGGAAAGACAGAAGTTCTCGTG
TATATAGATTGCTTGGTTTTCCCTGCTACTGCCAGTACTAGTCCAATTTTTCGGGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTAT
GAGGAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGAGTTAATATTTGTCTATGTAAATGAAACAAACTTATCTTTTCTTCTGTCATTAGGTAAT
GTAAATGACTGTCAGTGAAGGTTCACTTCAATGTATGATCTGGC

Protein sequence

Show/hide protein sequence

MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRISNLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANS
LCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV

IVF0007057 (gene) of Melon (IVF77) v1 genome