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IVF0007060 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007060
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr12:15097363..15097587
RNA-Seq ExpressionIVF0007060
SyntenyIVF0007060
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.01e-2391.67Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
        MTAESS SLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQG EAEFELRT+GAIV +E
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
KAA0054351.1 reverse transcriptase [Cucumis melo var. makuwa]1.30e-38100Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY
KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa]1.11e-2288.33Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
        MTAESSGSLLAQFQ+RSSL+AEIVGRQ EDSNLQKMLAKAKQG EAEFELRT+GAIV +E
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
TYK05031.1 reverse transcriptase [Cucumis melo var. makuwa]4.36e-2396.49Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIV
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQG EAEFELRT GAIV
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIV
TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.11e-2288.33Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
        MTAESSGSLLAQFQ+RSSL+AEIVGRQ EDSNLQKMLAKAKQG EAEFELRT+GAIV +E
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein2.3e-1891.67Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
        MTAESS SLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQG EAEFELRT+GAIV +E
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
A0A5A7V9N3 Reverse transcriptase4.0e-1888.33Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
        MTAESSGSLLAQFQ+RSSL+AEIVGRQ EDSNLQKMLAKAKQG EAEFELRT+GAIV +E
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
A0A5D3BZC5 Reverse transcriptase1.8e-1896.49Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIV
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQG EAEFELRT GAIV
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIV
A0A5D3CMM1 Reverse transcriptase1.7e-29100Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY
        MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY
A0A5D3DSY7 Putative Retrotransposon protein4.0e-1888.33Show/hide
Query:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
        MTAESSGSLLAQFQ+RSSL+AEIVGRQ EDSNLQKMLAKAKQG EAEFELRT+GAIV +E
Subjt:  MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCAGAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCT
TGCAAAGGCCAAGCAAGGCCGAGAGGCAGAATTTGAGTTGAGAACGAACGGAGCCATAGTTAACAGGGAAGACTATGCGTTCCGAATATTAGTGAGCTTAAGGGTGCTAT
ACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCAGAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCT
TGCAAAGGCCAAGCAAGGCCGAGAGGCAGAATTTGAGTTGAGAACGAACGGAGCCATAGTTAACAGGGAAGACTATGCGTTCCGAATATTAGTGAGCTTAAGGGTGCTAT
ACTAG
Protein sequenceShow/hide protein sequence
MTAESSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGREAEFELRTNGAIVNREDYAFRILVSLRVLY