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IVF0007087 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007087
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:24281310..24281702
RNA-Seq ExpressionIVF0007087
SyntenyIVF0007087
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047169.1 zinc finger CCHC domain-containing protein 5-like [Cucumis melo var. makuwa]3.48e-1847.22Show/hide
Query:  DRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSR-RHS
        D+ K+FE+GL TTI+V VTA+ NW NF +MVEA MRVENTL   +KS K      E+NK K  G +EGFS++ K+   QG  WD +++ MC E +R R  
Subjt:  DRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSR-RHS

Query:  EMCRYNKD
         + +Y ++
Subjt:  EMCRYNKD

KAA0054739.1 uncharacterized protein E6C27_scaffold437G00090 [Cucumis melo var. makuwa]2.85e-1740.54Show/hide
Query:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS
        +CK F+E LRT  +  VT+SA+W +FSK+VEAT+  E  L    E+K  K+++S   M++ KE G  +   +  K  FSQ LHW   +   C EC ++H+
Subjt:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS

Query:  EMCRYNKDCFK
          CR+   CFK
Subjt:  EMCRYNKDCFK

KAA0065476.1 uncharacterized protein E6C27_scaffold17G001750 [Cucumis melo var. makuwa]4.25e-4396.15Show/hide
Query:  TREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVG
        TREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNK K  G
Subjt:  TREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVG

KAA0068140.1 gag protease polyprotein [Cucumis melo var. makuwa]1.74e-1444.68Show/hide
Query:  VTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHSEMCRYNK-DCFK
        +T SA+W  FSK++EA MRV+  L  E+KS ++K+S    + E+E    EG SKQ K  F QG  W G Q    +EC +RHS +C  N   CFK
Subjt:  VTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHSEMCRYNK-DCFK

TYJ99705.1 uncharacterized protein E5676_scaffold562G001040 [Cucumis melo var. makuwa]1.63e-1740.54Show/hide
Query:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS
        +CK F+E LRT  +  VT+SA+W +FSK+VEAT+  E  L    E+K  K+++S   M++ KE G  +   +  K  FSQ LHW   +   C EC ++H+
Subjt:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS

Query:  EMCRYNKDCFK
          CR+   CFK
Subjt:  EMCRYNKDCFK

TrEMBL top hitse value%identityAlignment
A0A5A7TPS8 Retrotrans_gag domain-containing protein1.1e-1039.29Show/hide
Query:  DRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRH
        D+C HFE+GLRT+I+  VT  A  L+FSK+VEA +R+E  LV   E+K  + + S   +++ +E   ++   K   + F QG HW GD+     EC  RH
Subjt:  DRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRH

Query:  SEMCRYNKDCFK
          + R    CFK
Subjt:  SEMCRYNKDCFK

A0A5A7U111 Zinc finger CCHC domain-containing protein 5-like2.8e-1447.22Show/hide
Query:  DRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSR-RHS
        D+ K+FE+GL TTI+V VTA+ NW NF +MVEA MRVENTL   +KS K      E+NK K  G +EGFS++ K+   QG  WD +++ MC E +R R  
Subjt:  DRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSR-RHS

Query:  EMCRYNKD
         + +Y ++
Subjt:  EMCRYNKD

A0A5A7UMQ3 Uncharacterized protein1.8e-1340.54Show/hide
Query:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS
        +CK F+E LRT  +  VT+SA+W +FSK+VEAT+  E  L    E+K  K+++S   M++ KE G  +   +  K  FSQ LHW   +   C EC ++H+
Subjt:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS

Query:  EMCRYNKDCFK
          CR+   CFK
Subjt:  EMCRYNKDCFK

A0A5A7VGM1 Uncharacterized protein7.7e-3394.94Show/hide
Query:  TREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGK
        TREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNK K  G+
Subjt:  TREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGK

A0A5D3BN18 Uncharacterized protein1.0e-1340.54Show/hide
Query:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS
        +CK F+E LRT  +  VT+SA+W +FSK+VEAT+  E  L    E+K  K+++S   M++ KE G  +   +  K  FSQ LHW   +   C EC ++H+
Subjt:  RCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLV--GEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSMCSECSRRHS

Query:  EMCRYNKDCFK
          CR+   CFK
Subjt:  EMCRYNKDCFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAATTTACAGAACTCGTGAAGTATGCAATACCCTTTTTAATGGACGAAGCAGAGATAGGTGCAAGCATTTTGAAGAGGGTCTAAGGACAACAATTCAAGTACC
AGTGACAGCAAGTGCTAATTGGTTGAACTTCTCTAAGATGGTGGAGGCGACTATGCGTGTAGAGAATACATTGGTTGGAGAAAAGAAGAGTTTTAAGAAGAAGAGATCAG
ACATGGAGATGAATAAAGAAAAGGAAGTGGGGAAGGATGAAGGATTTAGCAAGCAAGTTAAATATGGTTTTAGTCAAGGATTGCATTGGGATGGCGATCAGAATTCTATG
TGCTCAGAGTGCAGTAGACGACACTCAGAAATGTGCAGGTACAACAAGGATTGTTTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAATTTACAGAACTCGTGAAGTATGCAATACCCTTTTTAATGGACGAAGCAGAGATAGGTGCAAGCATTTTGAAGAGGGTCTAAGGACAACAATTCAAGTACC
AGTGACAGCAAGTGCTAATTGGTTGAACTTCTCTAAGATGGTGGAGGCGACTATGCGTGTAGAGAATACATTGGTTGGAGAAAAGAAGAGTTTTAAGAAGAAGAGATCAG
ACATGGAGATGAATAAAGAAAAGGAAGTGGGGAAGGATGAAGGATTTAGCAAGCAAGTTAAATATGGTTTTAGTCAAGGATTGCATTGGGATGGCGATCAGAATTCTATG
TGCTCAGAGTGCAGTAGACGACACTCAGAAATGTGCAGGTACAACAAGGATTGTTTTAAGTGA
Protein sequenceShow/hide protein sequence
MEGIYRTREVCNTLFNGRSRDRCKHFEEGLRTTIQVPVTASANWLNFSKMVEATMRVENTLVGEKKSFKKKRSDMEMNKEKEVGKDEGFSKQVKYGFSQGLHWDGDQNSM
CSECSRRHSEMCRYNKDCFK