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IVF0007104 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007104
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:31079476..31079946
RNA-Seq ExpressionIVF0007104
SyntenyIVF0007104
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025118.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.65e-4257.14Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        M E++ ++E+NV +L+I N S  LGE++ +SKLV K L SLP +FNMKVTAIE+AN ++KMKLD+LFGSL+TFEL LG+  SRRK+ +A ++V EE    
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVG
         + + NK+SL ES+ALLT QV+KLK+QF+KH+G
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVG

KAA0036901.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.57e-100100Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS
        QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS

KAA0038023.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.65e-4482.47Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEEN
        M EDQSLSEYNV ILDI N SFLLGERIPESKLVRK L SLPQRFNMKVT IE+ANDITKMKL+E FGSLKTFELTLG+ DSRR N + FSTV EEN
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEEN

KAA0041176.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.27e-4158.65Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        M E+++++E+NV +LDI N   +LGE++ +SKLVRK L SLP +FNMKVTAIE+AND++KMKLDELFGSL+TFEL +G+  S RK G+A ++V EE+   
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVG
         K + N +SL ES+ LLTKQV+KLK+QF+KH+G
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVG

TYK19361.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.65e-4257.14Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        M E++ ++E+NV +L+I N S  LGE++ +SKLV K L SLP +FNMKVTAIE+AN ++KMKLD+LFGSL+TFEL LG+  SRRK+ +A ++V EE    
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVG
         + + NK+SL ES+ALLT QV+KLK+QF+KH+G
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVG

TrEMBL top hitse value%identityAlignment
A0A5A7TGK3 Gag-pol polyprotein4.2e-3352.6Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        M E+++++E+NV +LDI N   +LGE++ +SKLVRK L SLP +FNMKVTAIE+AND++KMKLDELFGSL+TFEL +G+  S RK G+A ++V EE+   
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNS
         K + N +SL ES+ LLTKQV+KLK+QF+KH+G  ++     ++     S+S+S
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNS

A0A5A7TV27 Gag-pol polyprotein7.1e-3352.9Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        M E+++++E+NV +LDI N    LGE++  SKLV K L SLP +FNMKVT IE+AND++KMKLDELFGSL+TFEL LGN  SRRK  +A ++V EE+   
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSF
         + + N +SLAES+ LLTKQ++KLK+Q +KH+G    +N H+ S ++    S+SF
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSF

A0A5D3BB52 Gag-pol polyprotein7.1e-3352.9Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        M E+++++E+NV +LDI N    LGE++  SKLV K L SLP +FNMKVT IE+AND++KMKLDELFGSL+TFEL LGN  SRRK  +A ++V EE+   
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSF
         + + N +SLAES+ LLTKQ++KLK+Q +KH+G    +N H+ S ++    S+SF
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSF

A0A5D3DAN5 Gag-pol polyprotein4.9e-3482.47Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEEN
        M EDQSLSEYNV ILDI N SFLLGERIPESKLVRK L SLPQRFNMKVT IE+ANDITKMKL+E FGSLKTFELTLG+ DSRR N + FSTV EEN
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEEN

A0A5D3DV15 Gag-pol polyprotein5.2e-76100Show/hide
Query:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
        MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL
Subjt:  MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARL

Query:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS
        QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS
Subjt:  QKETLNKESLAESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGATCAATCACTCTCGGAATACAATGTCAATATTCTGGACATTACAAATGCGTCATTTCTCTTAGGAGAAAGGATTCCTGAATCAAAGCTTGTAAGAAAGTT
TCTACCTTCTCTGCCTCAACGTTTCAATATGAAAGTGACAGCCATAGAGAAAGCCAACGACATCACCAAGATGAAACTGGATGAACTGTTTGGATCACTAAAAACCTTTG
AATTAACCTTAGGTAATGGTGACTCAAGGCGAAAGAATGGCATGGCGTTTTCAACAGTCAGTGAAGAAAATGCACGACTTCAGAAGGAAACTCTGAATAAAGAGTCACTT
GCTGAATCAATTGCTCTTTTAACTAAGCAAGTGTCAAAACTCAAGAATCAATTCTATAAGCATGTTGGAATAAACAAGAGTCAAAACTTCCATGACAACTCCTTCTCATC
CTACTCATCTGCCAGTAATAGCTTTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGATCAATCACTCTCGGAATACAATGTCAATATTCTGGACATTACAAATGCGTCATTTCTCTTAGGAGAAAGGATTCCTGAATCAAAGCTTGTAAGAAAGTT
TCTACCTTCTCTGCCTCAACGTTTCAATATGAAAGTGACAGCCATAGAGAAAGCCAACGACATCACCAAGATGAAACTGGATGAACTGTTTGGATCACTAAAAACCTTTG
AATTAACCTTAGGTAATGGTGACTCAAGGCGAAAGAATGGCATGGCGTTTTCAACAGTCAGTGAAGAAAATGCACGACTTCAGAAGGAAACTCTGAATAAAGAGTCACTT
GCTGAATCAATTGCTCTTTTAACTAAGCAAGTGTCAAAACTCAAGAATCAATTCTATAAGCATGTTGGAATAAACAAGAGTCAAAACTTCCATGACAACTCCTTCTCATC
CTACTCATCTGCCAGTAATAGCTTTAGCTAG
Protein sequenceShow/hide protein sequence
MGEDQSLSEYNVNILDITNASFLLGERIPESKLVRKFLPSLPQRFNMKVTAIEKANDITKMKLDELFGSLKTFELTLGNGDSRRKNGMAFSTVSEENARLQKETLNKESL
AESIALLTKQVSKLKNQFYKHVGINKSQNFHDNSFSSYSSASNSFS