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IVF0007108 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007108
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationchr11:5200112..5206095
RNA-Seq ExpressionIVF0007108
SyntenyIVF0007108
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]9.20e-9389.24Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+TNHKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TP+VPVE A+PEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

XP_008459202.1 PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo]2.46e-104100Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

XP_022944447.1 uncharacterized protein LOC111448897 [Cucurbita moschata]1.86e-9289.24Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVE A+PEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]1.93e-9491.14Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQTPKLAI+RKCS+TNHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVE A+PEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

XP_038902580.1 uncharacterized protein LOC120089235 [Benincasa hispida]2.26e-9391.77Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RK S+TN KLSVRAEYNDG RSGGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        AKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVE A+PEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983954.6e-80100Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

A0A5D3CQ66 Uncharacterized protein4.6e-80100Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

A0A6J1D647 uncharacterized protein LOC1110172731.4e-6888.61Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKS++FGQ PKLAI++KC +TN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        AKRP+YYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGNNTPAVPV EA+PE EATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488975.1e-7189.24Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS+T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPV EA+PEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

A0A6J1JGK4 uncharacterized protein LOC1114843148.7e-7189.24Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR
        MAAC APSLSVSGGLIKASDLSSKS+SFGQ PKLAI+RKCS++NHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRR

Query:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM
        A+RP+YYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPV EA+PEIEATM
Subjt:  AKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.2.7e-1640.44Show/hide
Query:  SVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDE--GLEKTRQTLNAK
        SVSFG      +     +T   L++++ Y D   SG  G FV GF+LGG + G L  ++APQI ++I   D     R      YDE   LEKTR+ L  K
Subjt:  SVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDE--GLEKTRQTLNAK

Query:  ISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEAT
        I+QLNSAID+VSS+L+  +      +  +  EIEAT
Subjt:  ISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEAT

AT3G02900.1 unknown protein4.9e-3452.12Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFR
        MA+  A  +S SG     +  +  ++    T  L ++ K S  +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+E+E+GF+
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFR

Query:  RAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAVPVEEAEPEIEAT
        + ++PMYYDEGLE+ R+ LN KI QLNSAID VSSRL+GG        ++P+VPV E + E EAT
Subjt:  RAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAVPVEEAEPEIEAT

AT3G02900.2 unknown protein2.2e-3461.6Show/hide
Query:  SKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG
        S  +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+E+E+GF++ ++PMYYDEGLE+ R+ LN KI QLNSAID VSSRL+GG
Subjt:  SKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG

Query:  -------NNTPAVPVEEAEPEIEAT
                ++P+VPV E + E EAT
Subjt:  -------NNTPAVPVEEAEPEIEAT

AT5G16660.1 unknown protein1.3e-3960.95Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILN
        MA+C A + LS+SG      +KA+ LS  +K  S  +T  L I +K ++T  K SV A Y DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILN

Query:  -EDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEEAEPEIEAT
         EDE+GF + K+P YYDEGLEKTR+TLN KI QLNSAIDNVSSRLRG   NT +  VPV E +PE+EAT
Subjt:  -EDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEEAEPEIEAT

AT5G16660.2 unknown protein2.1e-3760.36Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILN
        MA+C A + LS+SG      +KA+ LS  +K  S  +T  L I +K ++T  K SV A   DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILN

Query:  -EDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEEAEPEIEAT
         EDE+GF + K+P YYDEGLEKTR+TLN KI QLNSAIDNVSSRLRG   NT +  VPV E +PE+EAT
Subjt:  -EDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEEAEPEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTGCTTTGCTCCGTCGCTCTCCGTATCTGGGGGATTGATCAAGGCCTCGGATCTCTCTTCAAAGTCCGTTTCCTTTGGGCAAACACCAAAACTCGCCATCCG
GAGGAAGTGTTCAAAAACCAACCACAAGTTATCAGTTCGCGCTGAGTACAATGATGGTGGTAGAAGTGGCGGTGGGGATTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACCTTAGCTTATCTTTTTGCTCCCCAGATCAGGAGATCTATACTAAATGAAGACGAGCACGGTTTTAGGAGGGCTAAGCGTCCAATGTACTACGACGAAGGT
CTTGAGAAAACGAGACAGACATTGAATGCAAAAATAAGCCAATTGAATTCAGCGATTGATAATGTATCATCACGTTTGAGAGGTGGAAACAATACTCCAGCTGTCCCAGT
TGAAGAAGCTGAACCCGAGATTGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
GAGAAATGGGATTAGTTTCTCATGCCATGTTTTTTACATTATTTTAAAAAAAAGATTCCCAAATAAGAGCCGGCTATCTTCAACTCAACACTCTCTTCTTCCTTCTTCAC
TGCTCTTCTCCAATTCCTCTCCAGATCTCTTCTCTGAATCCTCTCCTTTCACATGGCCGCCTGCTTTGCTCCGTCGCTCTCCGTATCTGGGGGATTGATCAAGGCCTCGG
ATCTCTCTTCAAAGTCCGTTTCCTTTGGGCAAACACCAAAACTCGCCATCCGGAGGAAGTGTTCAAAAACCAACCACAAGTTATCAGTTCGCGCTGAGTACAATGATGGT
GGTAGAAGTGGCGGTGGGGATTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTATCTTTTTGCTCCCCAGATCAGGAGATCTATACTAAATGA
AGACGAGCACGGTTTTAGGAGGGCTAAGCGTCCAATGTACTACGACGAAGGTCTTGAGAAAACGAGACAGACATTGAATGCAAAAATAAGCCAATTGAATTCAGCGATTG
ATAATGTATCATCACGTTTGAGAGGTGGAAACAATACTCCAGCTGTCCCAGTTGAAGAAGCTGAACCCGAGATTGAAGCTACCATGTAAAAATTCAATTTAAACATTGTT
CAACATAAGGTAGTTTTAAATTTTCACCTTCTTATAGACCATATATTGAATTCATGTCACAATATGCCACAACTTTTAATTGCAACTTCTTTTTTGGATTCATCAGGT
Protein sequenceShow/hide protein sequence
MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEG
LEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM