; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0007129 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007129
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L34
Genome locationchr02:21578552..21580746
RNA-Seq ExpressionIVF0007129
SyntenyIVF0007129
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002318779.1 60S ribosomal protein L34 [Populus trichocarpa]8.59e-5897.89Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAF
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF

XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]3.10e-5898.95Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF

XP_021597596.1 60S ribosomal protein L34-like [Manihot esculenta]3.10e-5898.95Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]3.10e-5898.95Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]4.40e-5897.89Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF

TrEMBL top hitse value%identityAlignment
A0A0A0LK03 Uncharacterized protein3.6e-4489.52Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

A0A0A0LSC0 Uncharacterized protein7.2e-4589.62Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRRY
        ++ +RY
Subjt:  RLSRRY

A0A1S3BV34 60S ribosomal protein L343.6e-4489.52Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

A0A5A7UWQ0 60S ribosomal protein L343.6e-4489.52Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

A0A6P6V549 60S ribosomal protein L343.6e-4489.52Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L344.0e-4585.71Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYR+RHSYATKSNQHRV+KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

P41098 60S ribosomal protein L342.4e-4585.71Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRLTYRKRHSYATKSNQHRV+KTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

Q42351 60S ribosomal protein L34-19.0e-4584.76Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRL YR RHSYATKSNQHR++KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

Q9FE65 60S ribosomal protein L34-23.4e-4483.81Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRL YR RHSYATKSNQHR++KTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

Q9LJW6 60S ribosomal protein L34-34.9e-4381.9Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRL YR RHSYATKSNQHR++KTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein6.4e-4684.76Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRL YR RHSYATKSNQHR++KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

AT1G26880.2 Ribosomal protein L34e superfamily protein7.8e-4491.3Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII
        MVQRL YR RHSYATKSNQHR++KTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII

AT1G69620.1 ribosomal protein L342.4e-4583.81Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRL YR RHSYATKSNQHR++KTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR

AT3G28900.1 Ribosomal protein L34e superfamily protein3.5e-4481.9Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR
        MVQRL YR RHSYATKSNQHR++KTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAF  + +
Subjt:  MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSR

Query:  RLSRR
        ++ ++
Subjt:  RLSRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTTCTCAAAACCCCCGGTGGGAAGCTCGTGTATCAGACTACCAAGAA
AAGAGCCAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTAGCTAGGAACCGGAGGACCG
TGAATCGTGCGTATGGTGGTGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGA
mRNA sequenceShow/hide mRNA sequence
CCCTCCCTCCCAAGTTCCCAACTCCATTTGGCAGTCCCCTCTTCATTCCTCCTCACCGTCGCGTCGTTCGTTGCCATACCTAGTCGTCTTGTTTTTTTTATCCCCTCCTT
CAATATTGTCTCTGCAGCAGCATTCGAGATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTTCTCAAAACCCCCGGTG
GGAAGCTCGTGTATCAGACTACCAAGAAAAGAGCCAGCGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGG
TCTAGACTAGCTAGGAACCGGAGGACCGTGAATCGTGCGTATGGTGGTGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTGGTGGAAGAGCAGAAG
ATTGTCAAGAAGGTATTGAAGATTCAGAAGGCGAAGGAAAAGTTGGCATCAAAGAGCTAAATTTATTATGTTGAAATTTTGACTTTTTTGTGACGTGATGCTGAATTTTA
GCAATTACTATTTAAAGTTTGTTTGTGGAAGAACGAGATTTTAGGCCAGGAGTTCACTTCTATGATATGATGGCATTTCTTCAACCAATTTCTCATAGTGCGTTTGATTA
ATCGTCTCCTTTCCAACATCTTCTGTTCCTCAAGTTAGAACATGTTCCACTTTGGGTGTTTGTTGACCATAAATCTTTAGTGAACACCAGTAGTCTTCTCTTGAATTCGA
CTTGGTTATTGGAAATCTGATTTATAAGGTGTTGACTGTTTGTATGTGAGTTTATCGGTGATCTAAGTAAAGACGACGAAGAAGACCTCTTGGACGAAGCAAGTGGTTTT
TGTAAGTGAGAAATGACC
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVLKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFWWKSRRLSRRY