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IVF0007163 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007163
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr03:15177041..15177566
RNA-Seq ExpressionIVF0007163
SyntenyIVF0007163
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025991.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]7.26e-0752.08Show/hide
Query:  SVKSELPSKEKSARLGS--ARLGLWLGSAWPRLGSTRLT-RLGSRLTRLAARLGSAGGSAHSAQLAAHSARLAA-HSARLAAHSARLGQPAWSRVG
        S +    S   SAR GS    LG  LGS   RLG  RL  RL +RLTRLAARLGSA GSAHSA+ +AHSAR +A   +RL +    LG    SR+G
Subjt:  SVKSELPSKEKSARLGS--ARLGLWLGSAWPRLGSTRLT-RLGSRLTRLAARLGSAGGSAHSAQLAAHSARLAA-HSARLAAHSARLGQPAWSRVG

KAA0032698.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.29e-0658.33Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        +SVDLP+ERKLSPTRP A PEN SV S LPS+EKS  +  + +   +G
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

KAA0054224.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.48e-1275Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKS  +  + +   +G
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

KAA0054655.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]6.29e-0659.57Show/hide
Query:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        SVDLPKERKLSPT+P A PEN SV S LPS+EKS  +  + +   +G
Subjt:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

KAA0068117.1 retrotransposon protein [Cucumis melo var. makuwa]2.81e-1072.34Show/hide
Query:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        SVDLPKERKLSPTRPTARPENPSVKSELPS+EKS  +  + +   +G
Subjt:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

TrEMBL top hitse value%identityAlignment
A0A5A7SP62 CCR4-NOT transcription complex subunit 12.4e-0452.17Show/hide
Query:  SVKSELPSKEKSARLGS--ARLGLWLGSAWPRLGSTRL-TRLGSRLTRLAARLGSAGGSAHSAQLAAHSARLAAH-----SARLAAHSARLG
        S +    S   SAR GS    LG  LGS   RLG  RL  RL +RLTRLAARLGSA GSAHSA+ +AHSAR +A       +RL +  +RLG
Subjt:  SVKSELPSKEKSARLGS--ARLGLWLGSAWPRLGSTRL-TRLGSRLTRLAARLGSAGGSAHSAQLAAHSARLAAH-----SARLAAHSARLG

A0A5A7SQ80 NBS-LRR type resistance protein9.2e-0458.33Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        +SVDLP+ERKLSPTRP A PEN SV S LPS+EKS  +  + +   +G
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

A0A5A7UGC7 NBS-LRR type resistance protein1.2e-0875Show/hide
Query:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKS  +  + +   +G
Subjt:  MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

A0A5A7VLK0 Retrotransposon protein1.4e-0772.34Show/hide
Query:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG
        SVDLPKERKLSPTRPTARPENPSVKSELPS+EKS  +  + +   +G
Subjt:  SVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGCGCTCG
GCTCGGCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCGGCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTG
GTTCGGCTGGCGGCTCGGCTCACTCGGCTCAGCTCGCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGGACAGCCGGCT
TGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGCGCTCG
GCTCGGCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCGGCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTG
GTTCGGCTGGCGGCTCGGCTCACTCGGCTCAGCTCGCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGGACAGCCGGCT
TGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG
Protein sequenceShow/hide protein sequence
MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKSARLGSARLGLWLGSAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSAQLAAHSARLAAHSARLAAHSARLGQPA
WSRVGLDERKW