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IVF0007175 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007175
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:8381723..8382034
RNA-Seq ExpressionIVF0007175
SyntenyIVF0007175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035247.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.07e-1040.86Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM
        +ERNVR+HGT K +AA  F++HN   EA+T+ G  AIP ++T  + +   +     S S+H + K +NS +S+    D +L+ RR+EKGK I+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM

KAA0047997.1 hypothetical protein E6C27_scaffold385G00620 [Cucumis melo var. makuwa]2.68e-1040.2Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVRKDL
        +ERNV  HGT K EAA  F+  N   E FTF  +HAIPP+N+  + +SK      +SDS+    K ++S +S+    D   + RR+EKGK I++   +D+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVRKDL

Query:  TN
         N
Subjt:  TN

KAA0050754.1 hypothetical protein E6C27_scaffold404G00010 [Cucumis melo var. makuwa]1.15e-0837.23Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMT
        +ERNV  HG+ K +A   F+EHN + +A++F+  HA+P + T  +  +K +     SD D  +TK  +S D +    D ++  RR+EKGK IM+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMT

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.61e-0839.78Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM
        +ERNVR+HG+ + +AA  F++HN   E +T+ G  AIPP+ T    +  I      S S H + K +NS +S+    D +L+ RR+EKGK I+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM

TYJ97061.1 hypothetical protein E5676_scaffold506G001290 [Cucumis melo var. makuwa]1.14e-0940.95Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPP---KNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVR
        +ERNV  HG+ + EAA  F+EHN K EAF+FI  H +PP   KN DG    +     NS   DH   K  +S DSK    D     + +EKGK +M+   
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPP---KNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVR

Query:  KDLTN
        +DL++
Subjt:  KDLTN

TrEMBL top hitse value%identityAlignment
A0A5A7U199 DUF4283 domain-containing protein6.2e-0940.2Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVRKDL
        +ERNV  HGT K EAA  F+  N   E FTF  +HAIPP+N+  + +SK      +SDS+    K ++S +S+    D   + RR+EKGK I++   +D+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVRKDL

Query:  TN
         N
Subjt:  TN

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein2.6e-0739.78Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM
        +ERNVR+HG+ + +AA  F++HN   E +T+ G  AIPP+ T    +  I      S S H + K +NS +S+    D +L+ RR+EKGK I+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM

A0A5D3BEH7 Uncharacterized protein4.0e-0840Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPP---KNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVR
        +ERNV  HG+ + EAA  F+EHN K EAF+FI  H +PP   KN DG    +      +++SDH   K  +S DSK    D     + +EKGK +M+   
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPP---KNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVR

Query:  KDLTN
        +DL++
Subjt:  KDLTN

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein2.6e-0739.78Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM
        +ERNVR+HG+ + +AA  F++HN   E +T+ G  AIPP+ T    +  I      S S H + K +NS +S+    D +L+ RR+EKGK I+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM

A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein6.2e-0940.86Show/hide
Query:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM
        +ERNVR+HGT K +AA  F++HN   EA+T+ G  AIP ++T  + +   +     S S+H + K +NS +S+    D +L+ RR+EKGK I+
Subjt:  MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGAACGTTAGAATTCATGGTACTTTAAAAAAGGAAGCAGCTCTGGCGTTCAATGAACATAATGCAAAGGTAGAAGCTTTCACATTCATCGGAAGCCATGCTAT
CCCACCGAAAAATACAGATGGTAAATTTGAAAGTAAAATAATAATGATAGGCAACTCCTCTGACTCAGATCATGCAAAGACCAAGAATAGTAACTCCATGGATTCGAAAA
ATATTGCTTCTGATTTAGAATTGAATGCAAGAAGGAGAGAGAAGGGCAAAACAATTATGACAGAAGTTAGGAAAGATCTTACAAATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGAACGTTAGAATTCATGGTACTTTAAAAAAGGAAGCAGCTCTGGCGTTCAATGAACATAATGCAAAGGTAGAAGCTTTCACATTCATCGGAAGCCATGCTAT
CCCACCGAAAAATACAGATGGTAAATTTGAAAGTAAAATAATAATGATAGGCAACTCCTCTGACTCAGATCATGCAAAGACCAAGAATAGTAACTCCATGGATTCGAAAA
ATATTGCTTCTGATTTAGAATTGAATGCAAGAAGGAGAGAGAAGGGCAAAACAATTATGACAGAAGTTAGGAAAGATCTTACAAATCCATAA
Protein sequenceShow/hide protein sequence
MERNVRIHGTLKKEAALAFNEHNAKVEAFTFIGSHAIPPKNTDGKFESKIIMIGNSSDSDHAKTKNSNSMDSKNIASDLELNARRREKGKTIMTEVRKDLTNP