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IVF0007195 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007195
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr06:23412410..23412808
RNA-Seq ExpressionIVF0007195
SyntenyIVF0007195
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035422.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]9.50e-5162.31Show/hide
Query:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
        ++++ G E PS KD AGK TLK EITW+K+ DE + GN RALNA+FNG++ N+FK INTC  AKEAWNILE  YEGTSKVK+ +LQIL+S+FEA+K+ +D
Subjt:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD

Query:  ETIAKFNVWMLDLVNESFAICEKIAKSKMV
        ETI +FNV +LDL NESFA+ EK+  +K V
Subjt:  ETIAKFNVWMLDLVNESFAICEKIAKSKMV

KAA0038855.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.11e-8499.22Show/hide
Query:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
        +SVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
Subjt:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD

Query:  ETIAKFNVWMLDLVNESFAICEKIAKSKM
        ETIAKFNVWMLDLVNESFAICEKIAKSKM
Subjt:  ETIAKFNVWMLDLVNESFAICEKIAKSKM

KAA0050148.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]9.71e-5185.44Show/hide
Query:  TKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFNVWMLDLVNESFAICEKIAKS
        TKE DEESL N RALNALFNG++ NVFKLINTCTSAKEAWNILEV YEGTSKVKV RLQILTSRFEALK+NDDETIAKFNV +LDL NESF + EKIAKS
Subjt:  TKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFNVWMLDLVNESFAICEKIAKS

Query:  KMV
        KMV
Subjt:  KMV

KAA0060354.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.63e-5371.54Show/hide
Query:  ELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFN
        E PSIKD  GKT  KPEITW KE DE SLGN RALNALFNG++ +VFKLINTCTS K+ WN+LEV YEGTS VKV RLQILTSRFEALK+ ++ETI +FN
Subjt:  ELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFN

Query:  VWMLDLVNESFAICEKIAKSKMV
        V +LD  NESFA+ E I +SKMV
Subjt:  VWMLDLVNESFAICEKIAKSKMV

TYK29881.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.26e-5067.97Show/hide
Query:  VLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDET
        VL G EL S KD   K  LKP+ITWTKE DE SLGN  ALNALFN ++ NVFK+ NT TSAKEAWNILEV YEGTSK+KV +LQILT RFEALK+  +ET
Subjt:  VLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDET

Query:  IAKFNVWMLDLVNESFAICEKIAKSKMV
        I +FNV +LDL NE F + EKI+ SKMV
Subjt:  IAKFNVWMLDLVNESFAICEKIAKSKMV

TrEMBL top hitse value%identityAlignment
A0A1S3CKP5 uncharacterized protein LOC1035020612.5e-3962.31Show/hide
Query:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
        ++++ G E PS KD AGK TLK EITW+K+ DE + GN RALNA+FNG++ N+FK INTC  AKEAWNILE  YEGTSKVK+ +LQIL+S+FEA+K+ +D
Subjt:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD

Query:  ETIAKFNVWMLDLVNESFAICEKIAKSKMV
        ETI +FNV +LDL NESFA+ EK+  +K V
Subjt:  ETIAKFNVWMLDLVNESFAICEKIAKSKMV

A0A5A7SVY3 Gag-proteinase polyprotein2.5e-3962.31Show/hide
Query:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
        ++++ G E PS KD AGK TLK EITW+K+ DE + GN RALNA+FNG++ N+FK INTC  AKEAWNILE  YEGTSKVK+ +LQIL+S+FEA+K+ +D
Subjt:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD

Query:  ETIAKFNVWMLDLVNESFAICEKIAKSKMV
        ETI +FNV +LDL NESFA+ EK+  +K V
Subjt:  ETIAKFNVWMLDLVNESFAICEKIAKSKMV

A0A5A7U4G8 Gag-proteinase polyprotein4.3e-3985.44Show/hide
Query:  TKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFNVWMLDLVNESFAICEKIAKS
        TKE DEESL N RALNALFNG++ NVFKLINTCTSAKEAWNILEV YEGTSKVKV RLQILTSRFEALK+NDDETIAKFNV +LDL NESF + EKIAKS
Subjt:  TKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFNVWMLDLVNESFAICEKIAKS

Query:  KMV
        KMV
Subjt:  KMV

A0A5A7UZ81 Gag-pol polyprotein3.9e-4071.54Show/hide
Query:  ELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFN
        E PSIKD  GKT  KPEITW KE DE SLGN RALNALFNG++ +VFKLINTCTS K+ WN+LEV YEGTS VKV RLQILTSRFEALK+ ++ETI +FN
Subjt:  ELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFN

Query:  VWMLDLVNESFAICEKIAKSKMV
        V +LD  NESFA+ E I +SKMV
Subjt:  VWMLDLVNESFAICEKIAKSKMV

A0A5D3CDY8 Gag-pol polyprotein1.7e-6499.22Show/hide
Query:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
        +SVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD
Subjt:  ESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDD

Query:  ETIAKFNVWMLDLVNESFAICEKIAKSKM
        ETIAKFNVWMLDLVNESFAICEKIAKSKM
Subjt:  ETIAKFNVWMLDLVNESFAICEKIAKSKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATCAGTACTGACTGGAAGGGAGCTACCCTCCATTAAAGATGCTGCTGGAAAAACTACTCTGAAACCTGAGATCACCTGGACAAAGGAAGTAGATGAAGAGTC
TCTTGGAAACTTGAGGGCTCTAAATGCGCTTTTCAATGGTATAAACCATAATGTCTTCAAACTTATCAATACATGTACCTCAGCGAAGGAAGCCTGGAATATTCTGGAAG
TTACTTATGAAGGAACCTCTAAAGTCAAAGTATTAAGACTTCAGATCCTAACTTCACGATTTGAAGCACTCAAGATAAACGATGATGAAACTATAGCGAAATTCAATGTT
TGGATGCTGGATTTGGTCAATGAATCTTTTGCCATTTGCGAAAAAATCGCTAAATCCAAGATGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATCAGTACTGACTGGAAGGGAGCTACCCTCCATTAAAGATGCTGCTGGAAAAACTACTCTGAAACCTGAGATCACCTGGACAAAGGAAGTAGATGAAGAGTC
TCTTGGAAACTTGAGGGCTCTAAATGCGCTTTTCAATGGTATAAACCATAATGTCTTCAAACTTATCAATACATGTACCTCAGCGAAGGAAGCCTGGAATATTCTGGAAG
TTACTTATGAAGGAACCTCTAAAGTCAAAGTATTAAGACTTCAGATCCTAACTTCACGATTTGAAGCACTCAAGATAAACGATGATGAAACTATAGCGAAATTCAATGTT
TGGATGCTGGATTTGGTCAATGAATCTTTTGCCATTTGCGAAAAAATCGCTAAATCCAAGATGGTGTAG
Protein sequenceShow/hide protein sequence
MLESVLTGRELPSIKDAAGKTTLKPEITWTKEVDEESLGNLRALNALFNGINHNVFKLINTCTSAKEAWNILEVTYEGTSKVKVLRLQILTSRFEALKINDDETIAKFNV
WMLDLVNESFAICEKIAKSKMV