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IVF0007205 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007205
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr06:9610971..9611252
RNA-Seq ExpressionIVF0007205
SyntenyIVF0007205
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035612.1 No apical meristem (NAM) protein [Cucumis melo var. makuwa]9.13e-4585.87Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK E PTC YCGIKGHIADKCYKKHGYPPGY+PRNSN IT   + SKTNKVANTNS  ANHSPDFFSSLNSEQYSQLMTLLNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

KAA0057703.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.02e-4889.13Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK ECPTC+YCGIKGHIADKCY KHGYP GY+PRNSN ITTAPD SKTNKVANTNSA ANHSPDFFSSLNSEQYSQLMT+LNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

KAA0060409.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.02e-2769.51Show/hide
Query:  ECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASK-TNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        E PTCSYCG +GH+ADKCYKKHGYPP Y+P+NSN    A D SK  +KVANTNS   N SP FFSSL+SE Y QLMTLLN H
Subjt:  ECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASK-TNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.98e-4891.3Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK E PTCSYCGIKGHIADKCYKKHGYPPGY+PRNSNSITTAPD SKTN VANTNSA AN SPDFFSSLNSEQYSQLMTLLNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

XP_008463248.1 PREDICTED: uncharacterized protein LOC103501452 [Cucumis melo]6.10e-4989.13Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK ECPTC+YCGIKGHIADKCY KHGYP GY+PRNSN ITTAPD SKTNKVANTNSA ANHSPDFFSSLNSEQYSQLMT+LNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

TrEMBL top hitse value%identityAlignment
A0A1S3CJ63 uncharacterized protein LOC1035014522.7e-4089.13Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK ECPTC+YCGIKGHIADKCY KHGYP GY+PRNSN ITTAPD SKTNKVANTNSA ANHSPDFFSSLNSEQYSQLMT+LNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

A0A5A7V3S5 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-2269.51Show/hide
Query:  ECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASK-TNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        E PTCSYCG +GH+ADKCYKKHGYPP Y+P+NSN    A D SK  +KVANTNS   N SP FFSSL+SE Y QLMTLLN H
Subjt:  ECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASK-TNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 82.7e-4091.3Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK E PTCSYCGIKGHIADKCYKKHGYPPGY+PRNSNSITTAPD SKTN VANTNSA AN SPDFFSSLNSEQYSQLMTLLNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

A0A5D3DVP4 Putative mitochondrial protein2.7e-4089.13Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK ECPTC+YCGIKGHIADKCY KHGYP GY+PRNSN ITTAPD SKTNKVANTNSA ANHSPDFFSSLNSEQYSQLMT+LNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

A0A5D3E5P0 No apical meristem (NAM) protein3.1e-3685.87Show/hide
Query:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH
        MAIST+RNRK E PTC YCGIKGHIADKCYKKHGYPPGY+PRNSN IT   + SKTNKVANTNS  ANHSPDFFSSLNSEQYSQLMTLLNNH
Subjt:  MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCTCAACTAATCGAAATCGCAAAACAGAGTGTCCTACTTGCTCCTACTGTGGAATTAAGGGACACATAGCAGACAAATGTTACAAGAAACATGGATATCCTCC
AGGTTATGAGCCAAGAAACTCAAACTCCATTACTACTGCACCAGATGCCTCAAAAACCAACAAAGTTGCCAATACCAATTCAGCTCCTGCCAATCATTCTCCAGATTTTT
TCTCAAGCCTAAACTCAGAACAATATAGTCAATTGATGACTCTACTCAACAACCATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCTCAACTAATCGAAATCGCAAAACAGAGTGTCCTACTTGCTCCTACTGTGGAATTAAGGGACACATAGCAGACAAATGTTACAAGAAACATGGATATCCTCC
AGGTTATGAGCCAAGAAACTCAAACTCCATTACTACTGCACCAGATGCCTCAAAAACCAACAAAGTTGCCAATACCAATTCAGCTCCTGCCAATCATTCTCCAGATTTTT
TCTCAAGCCTAAACTCAGAACAATATAGTCAATTGATGACTCTACTCAACAACCATCCCTAA
Protein sequenceShow/hide protein sequence
MAISTNRNRKTECPTCSYCGIKGHIADKCYKKHGYPPGYEPRNSNSITTAPDASKTNKVANTNSAPANHSPDFFSSLNSEQYSQLMTLLNNHP