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IVF0007295 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007295
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor bHLH36
Genome locationchr08:18467072..18467323
RNA-Seq ExpressionIVF0007295
SyntenyIVF0007295
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033316.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]6.96e-3789.47Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRR
        MDK VVELGRERERQRRQEISALYM LR LLPLEFIKVICGTVHRGRDKQREKKRKKKDQEL  DD+GL VVGL R
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRR
KAA0044825.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]7.55e-15100Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
        MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
KAA0065871.1 retrotransposon protein [Cucumis melo var. makuwa]1.90e-2883.78Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGL
        MDKGVV+L RERERQRRQEI ALYM++RTLL LEFIKVICG VHR RDK REKKRKKKDQELI DDMGLL V L
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGL
TYK30150.1 transcription factor bHLH36 [Cucumis melo var. makuwa]5.20e-3984.34Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRRREGTTWR
        MDKG+VELGRERERQRRQEI ALYMSLRTLLPLEFIKVI GT+HRGRDK REKKRKKKDQEL  D MGLL VGLR +E  TWR
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRRREGTTWR
XP_022967981.1 transcription factor bHLH118-like [Cucurbita maxima]1.36e-0592.86Show/hide
Query:  RERERQRRQEISALYMSLRTLLPLEFIK
        RERERQRRQE+ ALYMSLRTLLPLEFIK
Subjt:  RERERQRRQEISALYMSLRTLLPLEFIK
TrEMBL top hitse value%identityAlignment
A0A5A7STJ5 Transcription factor bHLH36-like1.4e-2789.47Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRR
        MDK VVELGRERERQRRQEISALYM LR LLPLEFIKVICGTVHRGRDKQREKKRKKKDQEL  DD+GL VVGL R
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRR
A0A5A7TTV0 Transcription factor bHLH36-like2.6e-1077.78Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV-ICGTVHRGRDKQREK
        MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV +     RG +K   K
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV-ICGTVHRGRDKQREK
A0A5A7VJK9 Retrotransposon protein1.2e-2383.78Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGL
        MDKGVV+L RERERQRRQEI ALYM++RTLL LEFIKVICG VHR RDK REKKRKKKDQELI DDMGLL V L
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGL
A0A5D3E3K5 Transcription factor bHLH364.3e-2984.34Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRRREGTTWR
        MDKG+VELGRERERQRRQEI ALYMSLRTLLPLEFIKVI GT+HRGRDK REKKRKKKDQEL  D MGLL VGLR +E  TWR
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRRREGTTWR
A0A6J1CJV9 transcription factor bHLH118-like8.2e-0445.71Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIK---VICGTVHRGRDKQREKKRKKKDQELIIDDM
        +D     + RERERQRRQE+ +LYMSLRTLLPLEFIK    I   ++   +  + +K+K K+ E   D++
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIK---VICGTVHRGRDKQREKKRKKKDQELIIDDM
SwissProt top hitse value%identityAlignment
Q9FLI1 Transcription factor bHLH367.9e-0444.78Show/hide
Query:  RERERQRRQEISALYMSLRTLLPLEFIKVICGT---VHRGRDKQREKKRKKKDQELIIDDMGLLVVG
        RE ERQRRQE+++LY SLR+LLPL FIK    T   V+   +  +  +RK K+  +  DD+ +L  G
Subjt:  RERERQRRQEISALYMSLRTLLPLEFIKVICGT---VHRGRDKQREKKRKKKDQELIIDDMGLLVVG
Arabidopsis top hitse value%identityAlignment
AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.6e-0544.78Show/hide
Query:  RERERQRRQEISALYMSLRTLLPLEFIKVICGT---VHRGRDKQREKKRKKKDQELIIDDMGLLVVG
        RE ERQRRQE+++LY SLR+LLPL FIK    T   V+   +  +  +RK K+  +  DD+ +L  G
Subjt:  RERERQRRQEISALYMSLRTLLPLEFIKVICGT---VHRGRDKQREKKRKKKDQELIIDDMGLLVVG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGTCTCTTAGAACCCTACTTCCTCTTGAATTTATTAA
GGTAATTTGTGGGACTGTGCACAGAGGAAGAGATAAACAGAGGGAGAAGAAAAGAAAAAAGAAAGATCAAGAACTCATCATCGACGATATGGGTCTCCTCGTCGTGGGTC
TTCGTCGTCGAGAAGGAACGACGTGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGTCTCTTAGAACCCTACTTCCTCTTGAATTTATTAA
GGTAATTTGTGGGACTGTGCACAGAGGAAGAGATAAACAGAGGGAGAAGAAAAGAAAAAAGAAAGATCAAGAACTCATCATCGACGATATGGGTCTCCTCGTCGTGGGTC
TTCGTCGTCGAGAAGGAACGACGTGGAGATGA
Protein sequenceShow/hide protein sequence
MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHRGRDKQREKKRKKKDQELIIDDMGLLVVGLRRREGTTWR