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IVF0007345 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007345
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:21496523..21496761
RNA-Seq ExpressionIVF0007345
SyntenyIVF0007345
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056667.1 retrotransposon protein [Cucumis melo var. makuwa]7.63e-3679.75Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN
        MG Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMA+D          TVIFRGPHGHI RKYARNF+GN
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-2397.87Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
        MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMA+D
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]4.02e-24100Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
        MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]2.21e-2397.87Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
        MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMA+D
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD

XP_008462939.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]3.55e-3579.75Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN
        MG Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMA+D          TVIFRGPHGHI RKYARNF+GN
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN

TrEMBL top hitse value%identityAlignment
A0A0A0LY11 Uncharacterized protein9.8e-1965.82Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN
        MG    +  EEDDMDINLEDFDIPN HGLEPPS EDMSST TSM +D          T+IFRGPH HI  KYARNF+GN
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN

A0A1S3CI24 uncharacterized protein At2g29880-like1.3e-2679.75Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN
        MG Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMA+D          TVIFRGPHGHI RKYARNF+GN
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN

A0A5A7VGQ0 Retrotransposon protein1.1e-1797.87Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
        MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMA+D
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD

A0A5D3C2H8 Retrotransposon protein1.3e-2679.75Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN
        MG Q ARDTEEDDMDINLEDFDIPNPHGLEPPSGEDM STPTSMA+D          TVIFRGPHGHI RKYARNF+GN
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD----------TVIFRGPHGHILRKYARNFKGN

A0A5D3CKC1 Retrotransposon protein2.9e-18100Show/hide
Query:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
        MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD
Subjt:  MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTACAGATTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCAGGGGAGGACAT
GTCATCCACTCCAACAAGTATGGCATATGATACGGTCATATTCAGAGGACCTCATGGACACATTTTGCGCAAGTATGCGAGAAACTTCAAAGGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTACAGATTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCAGGGGAGGACAT
GTCATCCACTCCAACAAGTATGGCATATGATACGGTCATATTCAGAGGACCTCATGGACACATTTTGCGCAAGTATGCGAGAAACTTCAAAGGAAATTAG
Protein sequenceShow/hide protein sequence
MGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDTVIFRGPHGHILRKYARNFKGN