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IVF0007353 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007353
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCASP-like protein
Genome locationchr11:26773775..26774020
RNA-Seq ExpressionIVF0007353
SyntenyIVF0007353
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033465.1 CASP-like protein 1E1 isoform X4 [Cucumis melo var. makuwa]3.27e-50100Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

KAE8646986.1 hypothetical protein Csa_020948, partial [Cucumis sativus]1.44e-4391.46Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRT-GRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTT+T GRFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQLA SLPP+HVPVTARWHYLS+ V
Subjt:  MDGHRKAGFGVPDGSRSETTTRT-GRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

XP_004150813.1 CASP-like protein 1E1 [Cucumis sativus]4.62e-4391.46Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRT-GRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTT+T GRFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQLA SLPP+HVPVTARWHYLS+ V
Subjt:  MDGHRKAGFGVPDGSRSETTTRT-GRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

XP_008458485.1 PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo]1.08e-48100Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

XP_038875885.1 CASP-like protein 1E1 [Benincasa hispida]5.62e-4191.36Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDG RKAGFGVPDGSRSETTT   RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA +LPPLHVPVTARWHYLS+FV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

TrEMBL top hitse value%identityAlignment
A0A0A0KBW8 CASP-like protein2.4e-3291.46Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTR-TGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTT+ TGRFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQLA SLPP+HVPVTARWHYLS+ V
Subjt:  MDGHRKAGFGVPDGSRSETTTR-TGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

A0A1S3C7G4 CASP-like protein1.2e-36100Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

A0A5A7SWC2 CASP-like protein1.2e-36100Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

A0A6J1H563 CASP-like protein7.0e-2476.54Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDG RKAGFGV DGS     T T RFCDLI+RFVAMILTLAAA+VIGVDKQ KTV LQL A+LPPL +PVTARWHY S+FV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

A0A6J1L415 CASP-like protein5.3e-2477.78Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MDG RKAGFGV DGS    TT   RFCDLI+RFVAMILTLAAAVVIGVDKQ KTV LQL A+LPPL +PVTARWHY S+FV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

SwissProt top hitse value%identityAlignment
A7NW78 CASP-like protein 1E22.8e-1452.38Show/hide
Query:  MDGHRKAGFGVPDGSRSETTTRTG---RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        M+   K  FG  +    E    TG   R  DL++R VA+ LTL AAV++GVDKQTK V LQL  +LPP+ VPVTA+W YLS+FV
Subjt:  MDGHRKAGFGVPDGSRSETTTRTG---RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

B9HMP6 CASP-like protein 1E12.8e-1445.78Show/hide
Query:  MDGHRKAGFGVPDGSRSE---TTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSF
        M+   KA   V DG       + +     CDL++R +A++LTLAAA+V+GVDKQTK VP+++  +LP +++PV+A+WHYLS+F
Subjt:  MDGHRKAGFGVPDGSRSE---TTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSF

B9RT04 CASP-like protein 1E14.1e-1349.41Show/hide
Query:  MDGHRKAGFGVPDGSRS----ETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        MD   K      DG  S    E   RT  F  L++R +A +LT  AA+V GV+ QT+TVP+QL +S+PPL+VPV A+WHYLS+FV
Subjt:  MDGHRKAGFGVPDGSRS----ETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

C6SZP8 CASP-like protein 1E21.0e-1161.11Show/hide
Query:  DLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        DL++R +A  +TL AA+VI VDKQTK VP+QL+ SLPPL VP+TA+WH +S+ V
Subjt:  DLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

C6TBD0 CASP-like protein 1E15.3e-1361.82Show/hide
Query:  CDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        CDL++R +A  +TL AA+VI VDKQTK VP+QL+ S PPL+VP+TA+WH +S+FV
Subjt:  CDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

Arabidopsis top hitse value%identityAlignment
AT4G15620.1 Uncharacterised protein family (UPF0497)1.1e-0847.3Show/hide
Query:  GFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        G  +  G R E  +R G   +L +R +A+ILT+AAA V+GV KQTK V ++L  +LPPL +  TA+  YLS+FV
Subjt:  GFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV

AT4G15630.1 Uncharacterised protein family (UPF0497)9.6e-1048.48Show/hide
Query:  RSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV
        + E+ +R G   +L +R +A++LT+ AA V+GV KQTK VP++L  +LPPL+V  TA+  YLS+FV
Subjt:  RSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCCACAGGAAGGCCGGATTCGGTGTACCGGATGGATCGCGATCGGAGACGACGACGAGGACGGGTAGGTTTTGCGATCTTATTGTGAGGTTTGTAGCAATGAT
TCTCACTTTGGCTGCTGCTGTGGTTATTGGCGTGGATAAACAGACGAAAACGGTGCCGCTTCAACTTGCCGCCTCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGT
GGCATTATTTATCTTCCTTCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCCACAGGAAGGCCGGATTCGGTGTACCGGATGGATCGCGATCGGAGACGACGACGAGGACGGGTAGGTTTTGCGATCTTATTGTGAGGTTTGTAGCAATGAT
TCTCACTTTGGCTGCTGCTGTGGTTATTGGCGTGGATAAACAGACGAAAACGGTGCCGCTTCAACTTGCCGCCTCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGT
GGCATTATTTATCTTCCTTCGTGTAA
Protein sequenceShow/hide protein sequence
MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLAASLPPLHVPVTARWHYLSSFV