; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0007354 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007354
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionStructure-specific endonuclease subunit SLX1 homolog
Genome locationchr12:507761..509911
RNA-Seq ExpressionIVF0007354
SyntenyIVF0007354
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0033557 - Slx1-Slx4 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0008821 - crossover junction endodeoxyribonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR000305 - GIY-YIG endonuclease
IPR027520 - Structure-specific endonuclease subunit Slx1
IPR035901 - GIY-YIG endonuclease superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060004.1 Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa]6.31e-291100Show/hide
Query:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
        MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
Subjt:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP

Query:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEIC
        NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEIC
Subjt:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEIC

Query:  SFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
        SFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
Subjt:  SFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD

Query:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

KGN66284.2 hypothetical protein Csa_023148 [Cucumis sativus]7.01e-23693.31Show/hide
Query:  IGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNY
        I  +VNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNY
Subjt:  IGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNY

Query:  FSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETN
        FSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE DWEY+RE EEIC F+VYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETN
Subjt:  FSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETN

Query:  EQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTV
        EQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTV
Subjt:  EQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTV

Query:  EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  EYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

XP_004153269.1 structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus]1.13e-27293.02Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKT      DEEKEDD EEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
         DWEY+RE EEIC F+VYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC 
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

XP_008457313.1 PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo]2.57e-300100Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

XP_038894793.1 structure-specific endonuclease subunit SLX1 [Benincasa hispida]8.21e-24483.54Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKE+PEI KTMA   +++E ++D+EEEE  N VNGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+MKNAAGCPSLP+HMKVQVSPI+ELPCYSEGDQ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        DDWEY+RE EEICSF+VYGSMKEVSNEVPQKLMD+Q  TDGRP   L GCDKE E NEQVPPSSC PSY+D GMSYDL  CDE LE DERE ASC  SC 
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        V   SRTEIIIDDG+E+Q EG+GMNL++Q  RKNL+SGIASEISKVSRC+  L P VEYEVIDVSTPSPDCRT+SHR KR+VTSG+SE+IDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0M0Y6 Structure-specific endonuclease subunit SLX1 homolog3.6e-21493.02Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKT      DEEKE DDEEEERGN VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW GLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI+ELPCYSEGDQ +LENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
         DWEY+RE EEIC F+VYGSMKEVSNEVPQKLMDYQTGTDGRPP VLRGCDKELETNEQVPPSSCTPSY+DVGMSYDLCACDEGLENDEREAASCGQSC 
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEI+IDD EENQ EGS MNLQEQPGR+NLTSGIASEISKVSR +NG VPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

A0A1S3C574 Structure-specific endonuclease subunit SLX1 homolog2.2e-235100Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
        VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

Query:  L
        L
Subjt:  L

A0A5D3BBR0 Structure-specific endonuclease subunit SLX1 homolog4.4e-228100Show/hide
Query:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
        MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
Subjt:  MAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP

Query:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEIC
        NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEIC
Subjt:  NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEIC

Query:  SFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
        SFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD
Subjt:  SFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDD

Query:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
        GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
Subjt:  GEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL

A0A6J1HZQ2 Structure-specific endonuclease subunit SLX1 homolog3.3e-16779.06Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MR+RKEKPEI KTMA     EEK++DDE+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLP HM+VQ+SPIDELPCYSEGD+ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        +DWEY++E EE+CS QV+G M EV NE+PQ LMDY TGTDGRP   LRG D+EL+ NEQVP SSCTPSY+DVG+SYDL  C      DE+E A C Q CT
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV
        V G   TEIIIDDGEENQ EGSGM LQ+QPGRK   SGIA+EISKV   S GL P VEYEVIDVSTPSP CRTSSH+FKRR+
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV

A0A6J1I681 Structure-specific endonuclease subunit SLX1 homolog3.3e-16779.06Show/hide
Query:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN
        MR+RKEKPEI KTMA     EEK++DDE+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMV CIYGFPTN
Subjt:  MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLP HM+VQ+SPIDELPCYSEGD+ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENE

Query:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT
        +DWEY++E EE+CS QV+G M EV NE+PQ LMDY TGTDGRP   LRG D+EL+ NEQVP SSCTPSY+DVG+SYDL  C      DE+E A C Q CT
Subjt:  DDWEYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCT

Query:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV
        V G   TEIIIDDGEENQ EGSGM LQ+QPGRK   SGIA+EISKV   S GL P VEYEVIDVSTPSP CRTSSH+FKRR+
Subjt:  VAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRV

SwissProt top hitse value%identityAlignment
A7STV9 Structure-specific endonuclease subunit SLX1 homolog4.2e-2640.94Show/hide
Query:  NGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEI-RCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLS-GVAN
        +GF   YLL    P+FKGHTYIG+TVNP RRI+QHNG + + GA++T RK+PW M+L ++GFP ++ ALQFEWAWQ P  S  ++SAA   K     V  
Subjt:  NGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEI-RCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLS-GVAN

Query:  KVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI
          ++   +L +  W  L + + +   ++          P HM V   P+
Subjt:  KVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPI

Q0IH86 Structure-specific endonuclease subunit slx14.2e-2637.91Show/hide
Query:  VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVAN
        V GF+  YLL    P++KG  YIGFTVNP+RRI+QHN G+ + GAW+T  + PW+MVL ++GFP +++AL+FEWAWQHP+ S  +       K  S    
Subjt:  VNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVAN

Query:  KVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELP
         + +   ML +  W  L +T+ +   ++ +        P HM +    +   P
Subjt:  KVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELP

Q32PI0 Structure-specific endonuclease subunit SLX12.6e-2841.61Show/hide
Query:  GVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA
        G   FF  YLL    PR +G  Y+GFTVNP RR++QHN G  + GAWRT  + PWEMVL ++GFP+ V+AL+FEWAWQHP  S  +       +  +  A
Subjt:  GVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA

Query:  NKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP
          +++   ML  P W  L +T+ +    F ++   CP  P HM +   P
Subjt:  NKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP

Q5PQP5 Structure-specific endonuclease subunit SLX12.4e-2940.74Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL ++GFP+ V+AL+FEWAWQHP  S  +       +S +     ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------IDELPCYSEGD
        +   ML +P W  L +TV +    F      CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------IDELPCYSEGD

Q8BX32 Structure-specific endonuclease subunit SLX18.2e-3041.36Show/hide
Query:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G  + GAWRT  + PW+MVL I+GFP+ V+AL+FEWAWQHP  S  +       +S +  A  ++
Subjt:  FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHN-GEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------IDELPCYSEGD
        +   ML +P W  L +T+ +    F      CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSP------IDELPCYSEGD

Arabidopsis top hitse value%identityAlignment
AT2G30350.1 Excinuclease ABC, C subunit, N-terminal1.2e-3334.43Show/hide
Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDW
        LQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML LPAW  LN+TVNYFS+K+  +    PSLP HMKVQV  +++L  +++ D      +++ 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDW

Query:  EYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASC
            E ++        ++ +  N       D        P  V    D+         L+  E V       S++ VG         E + ND   + +C
Subjt:  EYDRESEEICSFQVYGSMKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASC

Query:  GQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKS
                    EI+ D+        +    +E   R+N  +   +E              V+ EVID+ TPSP CR  S   +RRV    SE IDLT S
Subjt:  GQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKS

Query:  PTFIQ
        P FI+
Subjt:  PTFIQ

AT2G30350.2 Excinuclease ABC, C subunit, N-terminal2.6e-7142.78Show/hide
Query:  EEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK
        E+   G    GFF+CYLL S  PR KG TYIGFTVNP+RRIRQHNGEI  GAWRTK+KRPWEMVLCIYGFPTNVSALQFEWAWQHP ES+AVR AAA FK
Subjt:  EEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK

Query:  SLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGSMKEVSNE
        S SGVA+K+KL YTML LPAW  LN+TVNYFS+K+  +    PSLP HMKVQV  +++L  +++ D      +++     E ++        ++ +  N 
Subjt:  SLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGSMKEVSNE

Query:  VPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQF
              D        P  V    D+         L+  E V       S++ VG         E + ND   + +C            EI+ D+      
Subjt:  VPQKLMDYQTGTDGRPPPVLRGCDK--------ELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQF

Query:  EGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ
          +    +E   R+N  +   +E              V+ EVID+ TPSP CR  S   +RRV    SE IDLT SP FI+
Subjt:  EGSGMNLQEQPGRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQ

AT5G43210.1 Excinuclease ABC, C subunit, N-terminal4.0e-0841.67Show/hide
Query:  FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ
        +S YL+ S     K  TY+G T +  RR++QHNGEIR GA  +   RPW     I GF     A  FE  W+
Subjt:  FSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCATGGCTGCAGTAGTACAGGATGAGGAGAAGGAAGATGATGATGAAGAAGAAGAGAGAGGAAACGGTGTGAA
TGGCTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAATCCGAAGCGCAGAATCAGACAACACAATGGTG
AAATTAGATGCGGTGCTTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTATCTGCTCTTCAGTTTGAATGGGCGTGG
CAGCATCCTAATGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATATACAATGCTCACACTTCCTGC
TTGGTGTGGTTTAAATATAACTGTAAACTACTTCTCAACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCTCCCATCG
ATGAGCTTCCATGCTATTCCGAAGGAGATCAAGGTGTGCTTGAAAATGAAGATGACTGGGAGTATGATAGAGAAAGTGAAGAAATTTGTAGTTTTCAAGTATATGGATCG
ATGAAAGAAGTTTCAAATGAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCCCGTATTGCGTGGATGTGATAAGGAGCTTGAGACCAA
TGAACAAGTGCCACCTTCTTCGTGTACTCCATCTTATGTTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTT
CGTGTGGTCAGTCTTGCACTGTAGCAGGTACATCTAGGACTGAAATTATCATTGATGACGGAGAGGAAAACCAATTCGAAGGGAGTGGTATGAACTTGCAGGAGCAACCA
GGTAGGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAGCAAAGTTTCAAGGTGTAGTAATGGCCTGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCC
GTCTCCCGACTGCCGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATCCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCATGGCTGCAGTAGTACAGGATGAGGAGAAGGAAGATGATGATGAAGAAGAAGAGAGAGGAAACGGTGTGAA
TGGCTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAATCCGAAGCGCAGAATCAGACAACACAATGGTG
AAATTAGATGCGGTGCTTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTATCTGCTCTTCAGTTTGAATGGGCGTGG
CAGCATCCTAATGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATATACAATGCTCACACTTCCTGC
TTGGTGTGGTTTAAATATAACTGTAAACTACTTCTCAACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCTCCCATCG
ATGAGCTTCCATGCTATTCCGAAGGAGATCAAGGTGTGCTTGAAAATGAAGATGACTGGGAGTATGATAGAGAAAGTGAAGAAATTTGTAGTTTTCAAGTATATGGATCG
ATGAAAGAAGTTTCAAATGAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCCCGTATTGCGTGGATGTGATAAGGAGCTTGAGACCAA
TGAACAAGTGCCACCTTCTTCGTGTACTCCATCTTATGTTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTT
CGTGTGGTCAGTCTTGCACTGTAGCAGGTACATCTAGGACTGAAATTATCATTGATGACGGAGAGGAAAACCAATTCGAAGGGAGTGGTATGAACTTGCAGGAGCAACCA
GGTAGGAAGAATTTAACATCAGGAATAGCTTCTGAAATCAGCAAAGTTTCAAGGTGTAGTAATGGCCTGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCC
GTCTCCCGACTGCCGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATCCAATTGTAA
Protein sequenceShow/hide protein sequence
MRKRKEKPEICKTMAAVVQDEEKEDDDEEEERGNGVNGFFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAW
QHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPIDELPCYSEGDQGVLENEDDWEYDRESEEICSFQVYGS
MKEVSNEVPQKLMDYQTGTDGRPPPVLRGCDKELETNEQVPPSSCTPSYVDVGMSYDLCACDEGLENDEREAASCGQSCTVAGTSRTEIIIDDGEENQFEGSGMNLQEQP
GRKNLTSGIASEISKVSRCSNGLVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL