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IVF0007386 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007386
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationchr02:11583078..11583651
RNA-Seq ExpressionIVF0007386
SyntenyIVF0007386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589745.1 hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sororia]1.61e-3867.68Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGS----SSASSSHSSSSSSGSDAGSEAGSYAGS-------
        MASI  + VV FLL  SVIVS++RVARKDLGLDLGG+G+G+GTG+GLGL GSGSG GSG GS    SS+SSS+SSSS SGS AGSEAGSYAGS       
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGS----SSASSSHSSSSSSGSDAGSEAGSYAGS-------

Query:  ---------YAGSRAGSGSGRNRNGGSGSGSGTGNG---------GEGYGEGHGYGEGHGYGNG
                 YAGSRAGSGSGRNRNGGSGSGSG G G         GEGYGEGHGYGEG GYG G
Subjt:  ---------YAGSRAGSGSGRNRNGGSGSGSGTGNG---------GEGYGEGHGYGEGHGYGNG

XP_008443812.1 PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]2.15e-68100Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
        MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG

Query:  RNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN
        RNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN
Subjt:  RNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN

XP_022921884.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]2.46e-4174.17Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR
        MASIR V+++  LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGL       GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAG  
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGTGNG-------GEGYGEGHGYGEGHGYGNGGEN
          SGSGRNRNGGSGSGSG+G+G       G G G G GYGEGHGYGN GEN
Subjt:  AGSGSGRNRNGGSGSGSGTGNG-------GEGYGEGHGYGEGHGYGNGGEN

XP_023515818.1 putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo]2.82e-4169.51Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
        MASIR V+++  LL +SVIVSESR+AR DLGLDLGG+G+G+GTGVGLGL GSGS  GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG

Query:  --------------------RNRNGGSGSGSGTGNG---------GEGYGEGHGYGEGHGYGNG
                            RNRNGGSGSGSG G G         GEGYGEGHGYGEG GYG G
Subjt:  --------------------RNRNGGSGSGSGTGNG---------GEGYGEGHGYGEGHGYGNG

XP_038879815.1 putative per-hexamer repeat protein 5 [Benincasa hispida]6.42e-5282.12Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR
        MASIR V ++ FLLGVSVIVSE RVAR +LGLDLGG+GLGVGTGVGLGL       GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGTGNG-------GEGYGEGHGYGEGHGYGNGGEN
        AGSGSGRNRNGGSGSGSG+G G       GEGYGEGHGYGEGHGYGNGGEN
Subjt:  AGSGSGRNRNGGSGSGSGTGNG-------GEGYGEGHGYGEGHGYGNGGEN

TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein9.4e-2970.39Show/hide
Query:  MASIRGVA-VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        MASI+ +A VV  LL  S I+SE RVARKDLG+DLGG+G+G+GTG+GLG+       GSGSG GSG GSSS+SSS+SSSSSSGS AGSEAGSYAGSYAGS
Subjt:  MASIRGVA-VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGSGSGTGNG----------GEGYGEGHGYGEGHGYGNG
        RAGSGSG NRNGGSG GSG G G          GEGYGEGHGYGEG GYG G
Subjt:  RAGSGSGRNRNGGSGSGSGTGNG----------GEGYGEGHGYGEGHGYGNG

A0A1S3B8Y8 putative glycine-rich cell wall structural protein 14.6e-52100Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
        MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG

Query:  RNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN
        RNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN
Subjt:  RNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN

A0A1S3B9N0 glycine-rich cell wall structural protein 2-like2.5e-2970.86Show/hide
Query:  MASIRGVA-VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS
        MASI+ +A VV  LL  SV +SE RVARKDLG+DLGG+G+G+G G+GLG+       GSGSG GSG GSSS+SSS+SSSSSSGS AGSEAGSYAGSYAGS
Subjt:  MASIRGVA-VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGSGSGTGNG---------GEGYGEGHGYGEGHGYGNG
        RAGSGSG NRNGGSG GSG G G         GEGYGEGHGYGEGHGYG G
Subjt:  RAGSGSGRNRNGGSGSGSGTGNG---------GEGYGEGHGYGEGHGYGNG

A0A6J1C497 putative glycine-rich cell wall structural protein 19.4e-2972.92Show/hide
Query:  MASIRGVAVVTFLLGVS-VIVSESRVARKDLGLDLGGMGLGVGTGVGLG-----LDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR
        MA+IR  AVV F+LG+S  IVSE+RVARKDLG+DLGG+G+G+G G+GLG       G+G+G GSG GSSS+SSS+SSSSSSGS AGSEAGSYAGSYAGSR
Subjt:  MASIRGVAVVTFLLGVS-VIVSESRVARKDLGLDLGGMGLGVGTGVGLG-----LDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGTGNG---GEGYGEGHGYGEGHGYGNG
        AGSGSG NR  GSGSG G G+G   GEGYGEGHGYGEGHGYG G
Subjt:  AGSGSGRNRNGGSGSGSGTGNG---GEGYGEGHGYGEGHGYGNG

A0A6J1E1T0 glycine-rich cell wall structural protein 2-like1.5e-3174.17Show/hide
Query:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR
        MASIR V+++  LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGL       GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSY    
Subjt:  MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGTGNG-------GEGYGEGHGYGEGHGYGNGGEN
        AGSGSGRNRNGGSGSGSG+G+G       G G G G GYGEGHGYGN GEN
Subjt:  AGSGSGRNRNGGSGSGSGTGNG-------GEGYGEGHGYGEGHGYGNGGEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein3.4e-1562.63Show/hide
Query:  FLLGVSVI-----VSESRVARKDLGLDLGGMGLGVGTGVGLGL-----DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
        FLLG+ VI     ++ESR+ARKDLG+DLGG+G+G+G G+G+GL      G+G+G GSG GS S+SSS SSSSSS S +G  AGS AGS+AGSRAGSGSG
Subjt:  FLLGVSVI-----VSESRVARKDLGLDLGGMGLGVGTGVGLGL-----DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG

AT4G30460.1 glycine-rich protein1.2e-2061.38Show/hide
Query:  VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPG------SSSASSSHSSSSSS---GSDAGSEAGSYAGSYAGS----RA
        ++T +L  SV+VSESRVARKDLGLDLGG+G G+G G+G+G  GSGSG G+G G      SSS+SSS SSSSSS   G DAGSEAGSYAGS+AGS    R+
Subjt:  VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPG------SSSASSSHSSSSSS---GSDAGSEAGSYAGSYAGS----RA

Query:  GSGSGRNRNGGSGSGSGTG-----NGGEGYGEGHGYGEGHGYGNG
        GSG GR   GG G G G G      GG G G G GYGEG GYG G
Subjt:  GSGSGRNRNGGSGSGSGTG-----NGGEGYGEGHGYGEGHGYGNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTAGGGGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGTGTGGCTAGAAAAGACTTGGGCCTCGACCTTGGCGGAAT
GGGCCTTGGTGTTGGAACAGGAGTGGGCTTGGGCTTAGATGGAAGTGGGTCGGGCTTTGGGTCTGGGCCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCA
GCTCTGGCTCCGACGCTGGGTCTGAAGCCGGCTCATACGCTGGCTCTTATGCCGGGTCTCGGGCCGGATCTGGTTCGGGCAGAAACAGAAACGGGGGATCCGGTTCCGGT
TCAGGGACGGGAAACGGTGGAGAAGGATACGGAGAGGGGCATGGATACGGCGAGGGGCATGGTTATGGCAACGGTGGCGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
AAATTACACAAAACAAAAAACAAAGCATTTCATTACTCTCAAATTCTAGTTCCCGTTAAAACCTTCTTCAATTTTGGTTCAATTACCAATCACACAAATAATGGCTTCCA
TTAGGGGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGTGTGGCTAGAAAAGACTTGGGCCTCGACCTTGGCGGAATGGGCCTTGGT
GTTGGAACAGGAGTGGGCTTGGGCTTAGATGGAAGTGGGTCGGGCTTTGGGTCTGGGCCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTC
CGACGCTGGGTCTGAAGCCGGCTCATACGCTGGCTCTTATGCCGGGTCTCGGGCCGGATCTGGTTCGGGCAGAAACAGAAACGGGGGATCCGGTTCCGGTTCAGGGACGG
GAAACGGTGGAGAAGGATACGGAGAGGGGCATGGATACGGCGAGGGGCATGGTTATGGCAACGGTGGCGAAAACTGAGATCGAACTTGTATATGAAATTAATTAAGGATT
ATCGTCATCTTTTCCTTTTGCAAA
Protein sequenceShow/hide protein sequence
MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSG
SGTGNGGEGYGEGHGYGEGHGYGNGGEN