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IVF0007408 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007408
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionmRNA cap-binding protein
Genome locationchr04:24990149..24990410
RNA-Seq ExpressionIVF0007408
SyntenyIVF0007408
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0006417 - regulation of translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141135.1 eukaryotic translation initiation factor NCBP [Cucumis sativus]1.61e-3196.77Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
        MEFVGE RDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEE SERIARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK

XP_008464961.1 PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo]3.57e-33100Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
        MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK

XP_022930593.1 eukaryotic translation initiation factor NCBP [Cucurbita moschata]1.12e-1970.15Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADD-----TNAKEAEEFSERIARDLKDGLHPLK
        ME V EK+DFDSANDNNK NSAQ +LDSS+ PS+A D      N+KEAE+ SER+ARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADD-----TNAKEAEEFSERIARDLKDGLHPLK

XP_038904119.1 eukaryotic translation initiation factor NCBP isoform X1 [Benincasa hispida]5.71e-2685.48Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
        ME VGEKRDFDSANDNNK NSAQPL DSS  PSL+DDTNAKEAE+ SER+ARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK

XP_038904120.1 eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida]2.85e-2685.48Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
        ME VGEKRDFDSANDNNK NSAQPL DSS  PSL+DDTNAKEAE+ SER+ARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK

TrEMBL top hitse value%identityAlignment
A0A0A0LI71 Uncharacterized protein2.6e-3095.89Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLKTQIRAYSLSEF
        MEFVGE RDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEE SERIARDLKDGLHPLKTQ+RAYSLSEF
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLKTQIRAYSLSEF

A0A1S3CMT8 mRNA cap-binding protein1.5e-25100Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
        MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK

A0A5A7UUL0 mRNA cap-binding protein1.5e-25100Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
        MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLK

A0A6J1EVP3 mRNA cap-binding protein4.1e-1570.15Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADD-----TNAKEAEEFSERIARDLKDGLHPLK
        ME V EK+DFDSANDNNK NSAQ +LDSS+ PS+A D      N+KEAE+ SER+ARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADD-----TNAKEAEEFSERIARDLKDGLHPLK

A0A6J1IS20 mRNA cap-binding protein4.1e-1570.15Show/hide
Query:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADD-----TNAKEAEEFSERIARDLKDGLHPLK
        ME V EK+DFDSANDNNK NSAQ +LDSS+ PS+A D      N+KEAE+ SER+ARDLKDGLHPLK
Subjt:  MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADD-----TNAKEAEEFSERIARDLKDGLHPLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCGTAGGCGAGAAGAGGGATTTTGATTCTGCCAACGACAACAACAAGCCTAACTCTGCTCAACCACTTCTTGATTCTTCTTTTCAACCCTCACTCGCTGATGA
TACTAATGCCAAAGAAGCTGAAGAATTTAGTGAACGCATAGCTCGAGACCTTAAAGATGGCCTTCATCCTCTAAAGACTCAAATACGTGCATATAGTTTATCTGAATTTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCGTAGGCGAGAAGAGGGATTTTGATTCTGCCAACGACAACAACAAGCCTAACTCTGCTCAACCACTTCTTGATTCTTCTTTTCAACCCTCACTCGCTGATGA
TACTAATGCCAAAGAAGCTGAAGAATTTAGTGAACGCATAGCTCGAGACCTTAAAGATGGCCTTCATCCTCTAAAGACTCAAATACGTGCATATAGTTTATCTGAATTTT
GA
Protein sequenceShow/hide protein sequence
MEFVGEKRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEEFSERIARDLKDGLHPLKTQIRAYSLSEF