CuGenDBv2

Gene ID	IVF0007493
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag protease polyprotein
Genome location	chr06:9348591..9348854
RNA-Seq Expression	IVF0007493
Synteny	IVF0007493
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032474.1 gag-protease polyprotein [Cucumis melo var. makuwa]

3.21e-44

94.25

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR STS QKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

KAA0035392.1 gag-protease polyprotein [Cucumis melo var. makuwa]

3.39e-44

94.25

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR STS QKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

KAA0035501.1 gag-protease polyprotein [Cucumis melo var. makuwa]

1.10e-43

90.8

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDA+FDMLSRFAPEMI TEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSKV GR S+S QKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

KAA0041026.1 gag-protease polyprotein [Cucumis melo var. makuwa]

2.32e-46

95.4

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR STS QKRKTEQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

TYK13745.1 gag-protease polyprotein [Cucumis melo var. makuwa]

2.50e-44

91.95

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTV+QYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRP THADALRLAVDLSLQERANSSK AGR STS QKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQP7 Gag protease polyprotein

4.7e-34

94.25

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL+L+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR STSRQKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

A0A5A7TG57 Gag-protease polyprotein

2.7e-34

95.4

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR STS QKRKTEQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

A0A5A7UD41 Reverse transcriptase

2.7e-34

95.4

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGR STS QKRKTEQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

A0A5A7UDK9 Gag protease polyprotein

1.6e-34

95.4

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRDSTS QKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

A0A5A7V810 Reverse transcriptase

3.6e-34

95.4

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Query:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ
        MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL+IQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGR STS QKRK EQ
Subjt:  MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACTGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACT
GAACATCCAGGGTTTGGTTCGAGCTTTCCGACCCGCCACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGGTCGCAG
GTAGAGATTCGACCTCGAGACAGAAAAGGAAGACTGAGCAGTAG

mRNA sequence

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Protein sequence

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MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLNIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRDSTSRQKRKTEQ

IVF0007493 (gene) of Melon (IVF77) v1 genome