; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0007548 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007548
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGirdin-like
Genome locationchr12:15975151..15975717
RNA-Seq ExpressionIVF0007548
SyntenyIVF0007548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025903.1 girdin-like [Cucumis melo var. makuwa]5.72e-9387.15Show/hide
Query:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKSV+KIKDKG YEG    YEAWQ NRRKNII ISR+VV RGKETSF+QPNQWIEKS+ELEEKNRLLEQENEKLRK+T QWMDHATYLQ ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLE NLE LDKEMRR+NKANRSLKNEKTTLQA VGSQDEYIKDLESGKEYFLELVNDL+TSIEK+ETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

KAA0055606.1 girdin-like [Cucumis melo var. makuwa]2.40e-10288.42Show/hide
Query:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKS++KIKDKG YEG    YEAWQANRRKNII ISR+VVERGKETSF+QPNQWIEKS ELEEKNRLLEQEN+KLRKET QWMDHATYLQ ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI
        NQDKLEKNLE LDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFL+LVNDL+TSI K ETQIMDLEAQ ILC+KLLIAYI
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]2.85e-9488.83Show/hide
Query:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKS++KIKDKG YEG    YEAWQANRRKNII ISR+VVERGK+TSFEQPNQWIEKSIELEEKNRLLEQENEKLRKET QWMDHATYLQ ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLEK+LE LDKEMRRMNKANRSLKNEKTTLQAT+GSQDEYIKDLE+GKEYFLE VNDL+TSI KRETQIMDLEAQN
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

TYK27808.1 girdin-like [Cucumis melo var. makuwa]1.00e-9387.71Show/hide
Query:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKSV+KIKDKG YEG    YEAWQ NRRKNII ISR+VV RGKETSF+QPNQWIEKS+ELEEKNRLLEQENEKLRK+T QWMDHATYLQKELEKTKSFL+
Subjt:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLE NLE LDKEMRR+NKANRSLKNEKTTLQA VGSQDEYIKDLESGKEYFLELVNDL+TSIEK+ETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

XP_016900531.1 PREDICTED: girdin-like [Cucumis melo]9.25e-9286.59Show/hide
Query:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKS++KIKDKG YEG    YEAWQANRRKNII ISR+VVERGKETSFEQPNQWI+KSIELEEKNRLLEQENEKLRKET QWMDHA YLQ ELEK KS L+
Subjt:  WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLEKNLE LDKEMRRMNKANRSLKNEKTTL+ATVGS+DEYIKDLESGKEYFLE VNDL TSI  RETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

TrEMBL top hitse value%identityAlignment
A0A5A7SMK0 Girdin-like2.4e-7587.15Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKSV+KIKDKG YE    GYEAWQ NRRKNII ISR+VV RGKETSF+QPNQWIEKS+ELEEKNRLLEQENEKLRK+T QWMDHATYLQ ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLE NLE LDKEMRR+NKANRSLKNEKTTLQA VGSQDEYIKDLESGKEYFLELVNDL+TSIEK+ETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

A0A5A7VFL0 Girdin-like2.5e-7788.83Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR+VVERGK+TSFEQPNQWIEKSIELEEKNRLLEQENEKLRKET QWMDHATYLQ ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLEK+LE LDKEMRRMNKANRSLKNEKTTLQAT+GSQDEYIKDLE+GKEYFLE VNDL+TSI KRETQIMDLEAQN
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

A0A5D3DK34 Girdin-like3.4e-7486.59Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR+VVERGKETSFEQPNQWI+KSIELEEKNRLLEQENEKLRKET QWMDHA YLQ ELEK KS L+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLEKNLE LDKEMRRMNKANRSLKNEKTTL+ATVGS+DEYIKDLESGKEYFLE VNDL TSI  RETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

A0A5D3DLE9 Girdin-like3.8e-8188.42Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR+VVERGKETSF+QPNQWIEKS ELEEKNRLLEQEN+KLRKET QWMDHATYLQ ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI
        NQDKLEKNLE LDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFL+LVNDL+TSI K ETQIMDLEAQ ILC+KLLIAYI
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI

A0A5D3DWE5 Girdin-like6.3e-7687.71Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR
        WKSV+KIKDKG YE    GYEAWQ NRRKNII ISR+VV RGKETSF+QPNQWIEKS+ELEEKNRLLEQENEKLRK+T QWMDHATYLQKELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLE NLE LDKEMRR+NKANRSLKNEKTTLQA VGSQDEYIKDLESGKEYFLELVNDL+TSIEK+ETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGT
TGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTA
AAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTA
GATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAG
TGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTAT
TGATAGCCTACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGT
TGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTA
AAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTA
GATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAG
TGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTAT
TGATAGCCTACATTTGA
Protein sequenceShow/hide protein sequence
MHWKSVKKIKDKGRYEGYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKL
DKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI