; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0007578 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007578
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:19293288..19294817
RNA-Seq ExpressionIVF0007578
SyntenyIVF0007578
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]1.48e-31287.4Show/hide
Query:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI
        M+EKDK M+KM QEINNLGEQVSKILELLS+ KGK VVDT QSSNPIQDTDD IYPPGFTPYH+NV QSQTTQHYVPTN LYVVPPI+PGI+HLEAQAKI
Subjt:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE TDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGSTCP SHLIMYCRKMA HINNDKLLVHCFQ+SLT PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR

Query:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQR+EKKSSESFKEYAQRWRDMV EVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG
        IGERIEYGIKHGRLAEATTEYGGIKKGTISK KEGEVHAIGFPNS                             SYVP HTVSETPKPVNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG

Query:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPI MTYTELLPQLI+NRQLA IPMIPIQP YPKWY+SNARCDYHAGGVGHSTENCLALKR VQSLINAGWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPNI
        PDHENP +
Subjt:  PDHENPNI

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]1.02e-29988.56Show/hide
Query:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE
        M+KM Q+INNLGEQVSKILELLS+ KGK  VDT QSSNPIQDTDD IYPPGFTPYH+NV QSQTTQHYVPTN LYVVPPI+P I+HLEAQAKIQDM QNE
Subjt:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE

Query:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN
        NT AKQKLDVLEERLRAIE TDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGST P SHLIMY RKMA HINNDKLLVHCFQ+SLTGPAS WYIQLDN
Subjt:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN

Query:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
        AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDM  EVQPPLTDKEMTSMF+NTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP
        GIKHGRLAEATTEYGGIKKGTISK KEGE+HAI          HTVSETPKPVNSNSPRPFVQGQGSKTN DTW+FDPI MTYTELLPQLI+NRQ+A IP
Subjt:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP

Query:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPLPDHENPNI
        MIPIQP YPKWY+SNARCDYHAGGVGHSTENCLALKR VQSLINAGWLSFKKSG+K NVNENPLPDHENP +
Subjt:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPLPDHENPNI

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]6.88e-30086.02Show/hide
Query:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI
        M+EKDK M+KM QEINNLGEQVSKILELLS+ KGK VVDT QSSNPIQDTDD IYPPGFTPYH+NV QSQTTQHYVPTN LYVVPPI+PGI+HLEAQAKI
Subjt:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE TDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGSTCP SHLIMY RKMA HINNDKLLVHCFQ+SLT PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR

Query:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPD LDLQRMEKKSSESFKEYAQRWRDM  EVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG
        IGERIEYGIKHGRLAEATTEYG IKKGTISK KEGEVHAIGFPNS                             SYVP HTVSETPKPVNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG

Query:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPI MTYTE+LPQLI+NRQLA IPMIPIQP Y KWY+SNARCDYHAGGVGHS ENCLALKR VQSLIN GWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPNI
        PDHENP +
Subjt:  PDHENPNI

KAA0046903.1 Gag-pro-like protein [Cucumis melo var. makuwa]0.0100Show/hide
Query:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE
        MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE
Subjt:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE

Query:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN
        NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN
Subjt:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN

Query:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
        AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP
        GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP
Subjt:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP

Query:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKV
        MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKV
Subjt:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKV

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]1.04e-31386.22Show/hide
Query:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI
        M+EKDK M+KM QEINN+GEQVSKILELLS+ KGKV VDTTQSSNPIQDTDD IYPP FTPYHMNV QSQTTQHY+PT+ LYVVPPIVPG++HLEAQAKI
Subjt:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR
        QDMGQNENT AKQKLDVLEERLRAIEGTDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGSTCP SHLIMYCRKMA HINNDKLLVHCFQ+SLTGPASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR

Query:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAP+RLDLQRMEKKSSESFKEYAQRW+DM  EVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG
        IGERIEYGIKHGRLAE TTEYGGIKKGTISK KEGE+HAIGFPNS                             SYVP HTVSETPKPVNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG

Query:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL
        QGSK NSDTWRFDPI MTYTELLPQLI+NRQLAPIPMIPIQP YPKWY+SNARCDYHAGGVGHSTENC ALKR VQSLINAGWLSFKKSGEK NVNENPL
Subjt:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPNI
        P+HENP +
Subjt:  PDHENPNI

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein5.4e-25787.4Show/hide
Query:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI
        M+EKDK M+KM QEINNLGEQVSKILELLS+ KGK VVDT QSSNPIQDTDD IYPPGFTPYH+NV QSQTTQHYVPTN LYVVPPI+PGI+HLEAQAKI
Subjt:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE TDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGSTCP SHLIMYCRKMA HINNDKLLVHCFQ+SLT PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR

Query:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQR+EKKSSESFKEYAQRWRDMV EVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG
        IGERIEYGIKHGRLAEATTEYGGIKKGTISK KEGEVHAIGFPNS                             SYVP HTVSETPKPVNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG

Query:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPI MTYTELLPQLI+NRQLA IPMIPIQP YPKWY+SNARCDYHAGGVGHSTENCLALKR VQSLINAGWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPNI
        PDHENP +
Subjt:  PDHENPNI

A0A5A7T5W2 Retrotrans_gag domain-containing protein9.9e-24388.56Show/hide
Query:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE
        M+KM Q+INNLGEQVSKILELLS+ KGK  VDT QSSNPIQDTDD IYPPGFTPYH+NV QSQTTQHYVPTN LYVVPPI+P I+HLEAQAKIQDM QNE
Subjt:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE

Query:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN
        NT AKQKLDVLEERLRAIE TDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGST P SHLIMY RKMA HINNDKLLVHCFQ+SLTGPAS WYIQLDN
Subjt:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN

Query:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
        AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDM  EVQPPLTDKEMTSMF+NTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP
        GIKHGRLAEATTEYGGIKKGTISK KEGE+HAI          HTVSETPKPVNSNSPRPFVQGQGSKTN DTW+FDPI MTYTELLPQLI+NRQ+A IP
Subjt:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP

Query:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPLPDHENPNI
        MIPIQP YPKWY+SNARCDYHAGGVGHSTENCLALKR VQSLINAGWLSFKKSG+K NVNENPLPDHENP +
Subjt:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPLPDHENPNI

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.2e-25186.02Show/hide
Query:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI
        M+EKDK M+KM QEINNLGEQVSKILELLS+ KGK VVDT QSSNPIQDTDD IYPPGFTPYH+NV QSQTTQHYVPTN LYVVPPI+PGI+HLEAQAKI
Subjt:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE TDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGSTCP SHLIMY RKMA HINNDKLLVHCFQ+SLT PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR

Query:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPD LDLQRMEKKSSESFKEYAQRWRDM  EVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG
        IGERIEYGIKHGRLAEATTEYG IKKGTISK KEGEVHAIGFPNS                             SYVP HTVSETPKPVNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG

Query:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL
        QGSKTNSDTWRFDPI MTYTE+LPQLI+NRQLA IPMIPIQP Y KWY+SNARCDYHAGGVGHS ENCLALKR VQSLIN GWLSFKKSGEKSNV ENPL
Subjt:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPNI
        PDHENP +
Subjt:  PDHENPNI

A0A5A7V3W7 Retrotrans_gag domain-containing protein1.3e-25586.22Show/hide
Query:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI
        M+EKDK M+KM QEINN+GEQVSKILELLS+ KGKV VDTTQSSNPIQDTDD IYPP FTPYHMNV QSQTTQHY+PT+ LYVVPPIVPG++HLEAQAKI
Subjt:  MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR
        QDMGQNENT AKQKLDVLEERLRAIEGTDVYGNID TQLCLVPGLIIPAKFKVP+FDKYDGSTCP SHLIMYCRKMA HINNDKLLVHCFQ+SLTGPASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASR

Query:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAP+RLDLQRMEKKSSESFKEYAQRW+DM  EVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG
        IGERIEYGIKHGRLAE TTEYGGIKKGTISK KEGE+HAIGFPNS                             SYVP HTVSETPKPVNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNS-----------------------------SYVPTHTVSETPKPVNSNSPRPFVQG

Query:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL
        QGSK NSDTWRFDPI MTYTELLPQLI+NRQLAPIPMIPIQP YPKWY+SNARCDYHAGGVGHSTENC ALKR VQSLINAGWLSFKKSGEK NVNENPL
Subjt:  QGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKVQSLINAGWLSFKKSGEKSNVNENPL

Query:  PDHENPNI
        P+HENP +
Subjt:  PDHENPNI

A0A5D3BVZ5 Gag-pro-like protein5.8e-259100Show/hide
Query:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE
        MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE
Subjt:  MNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNE

Query:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN
        NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN
Subjt:  NTPAKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDN

Query:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
        AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  AHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP
        GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP
Subjt:  GIKHGRLAEATTEYGGIKKGTISKMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIP

Query:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKV
        MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKV
Subjt:  MIPIQPSYPKWYNSNARCDYHAGGVGHSTENCLALKRKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAAAAGATAAGGGCATGAACAAAATGATACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATAGAGAAAGGAAAAGTCGT
TGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAGATGATCTCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTTCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATTCGCTATATGTTGTTCCACCCATTGTCCCAGGTATAAAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGGGCAAAACGAGAACACTCCG
GCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGGGACTGATGTCTATGGAAATATAGATATAACACAATTGTGCTTGGTGCCAGGCTTGATCAT
TCCAGCAAAGTTTAAAGTTCCTAAATTCGATAAATATGATGGATCAACGTGTCCAATGAGTCATCTTATAATGTACTGCAGAAAGATGGCGCCACATATTAATAATGATA
AATTGCTAGTCCATTGCTTCCAGAATAGCTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACGTTTGGAAGGACTTAGCTGATGCATTT
CTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGGAAAGCTTTAAAGAATATGCTCAACGATGGAGAGA
TATGGTTGTCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACAA
ATTTTTCTGATATTATTGTTATTGGCGAAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAATATCC
AAGATGAAAGAAGGAGAGGTTCATGCAATTGGTTTTCCTAATTCAAGCTATGTACCAACCCATACCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCGACC
ATTTGTACAGGGTCAAGGTAGCAAAACCAATTCAGATACATGGCGGTTTGATCCGATTTCCATGACTTATACAGAGCTTTTACCTCAACTAATTCGAAATCGACAGTTAG
CTCCTATTCCAATGATTCCTATACAACCTTCTTACCCAAAATGGTATAATTCAAATGCTCGATGTGATTATCATGCTGGAGGAGTGGGACACTCAACTGAAAATTGTTTG
GCTTTGAAAAGAAAGGTGCAATCTCTAATTAATGCTGGATGGTTAAGCTTCAAAAAATCTGGTGAGAAGTCGAATGTCAATGAAAATCCACTGCCTGATCATGAAAATCC
AAACATAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAAAAGATAAGGGCATGAACAAAATGATACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATAGAGAAAGGAAAAGTCGT
TGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAGATGATCTCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTTCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATTCGCTATATGTTGTTCCACCCATTGTCCCAGGTATAAAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGGGGCAAAACGAGAACACTCCG
GCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGGGACTGATGTCTATGGAAATATAGATATAACACAATTGTGCTTGGTGCCAGGCTTGATCAT
TCCAGCAAAGTTTAAAGTTCCTAAATTCGATAAATATGATGGATCAACGTGTCCAATGAGTCATCTTATAATGTACTGCAGAAAGATGGCGCCACATATTAATAATGATA
AATTGCTAGTCCATTGCTTCCAGAATAGCTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACGTTTGGAAGGACTTAGCTGATGCATTT
CTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGGAAAGCTTTAAAGAATATGCTCAACGATGGAGAGA
TATGGTTGTCGAGGTTCAACCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACAA
ATTTTTCTGATATTATTGTTATTGGCGAAAGAATTGAATATGGGATAAAACACGGGAGGTTAGCAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAATATCC
AAGATGAAAGAAGGAGAGGTTCATGCAATTGGTTTTCCTAATTCAAGCTATGTACCAACCCATACCGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCTCGACC
ATTTGTACAGGGTCAAGGTAGCAAAACCAATTCAGATACATGGCGGTTTGATCCGATTTCCATGACTTATACAGAGCTTTTACCTCAACTAATTCGAAATCGACAGTTAG
CTCCTATTCCAATGATTCCTATACAACCTTCTTACCCAAAATGGTATAATTCAAATGCTCGATGTGATTATCATGCTGGAGGAGTGGGACACTCAACTGAAAATTGTTTG
GCTTTGAAAAGAAAGGTGCAATCTCTAATTAATGCTGGATGGTTAAGCTTCAAAAAATCTGGTGAGAAGTCGAATGTCAATGAAAATCCACTGCCTGATCATGAAAATCC
AAACATAAGATAG
Protein sequenceShow/hide protein sequence
MKEKDKGMNKMIQEINNLGEQVSKILELLSIEKGKVVVDTTQSSNPIQDTDDLIYPPGFTPYHMNVSQSQTTQHYVPTNSLYVVPPIVPGIKHLEAQAKIQDMGQNENTP
AKQKLDVLEERLRAIEGTDVYGNIDITQLCLVPGLIIPAKFKVPKFDKYDGSTCPMSHLIMYCRKMAPHINNDKLLVHCFQNSLTGPASRWYIQLDNAHIHVWKDLADAF
LKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDMVVEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTIS
KMKEGEVHAIGFPNSSYVPTHTVSETPKPVNSNSPRPFVQGQGSKTNSDTWRFDPISMTYTELLPQLIRNRQLAPIPMIPIQPSYPKWYNSNARCDYHAGGVGHSTENCL
ALKRKVQSLINAGWLSFKKSGEKSNVNENPLPDHENPNIR