; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0007582 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007582
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchr08:23183050..23188117
RNA-Seq ExpressionIVF0007582
SyntenyIVF0007582
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060089.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]8.32e-17896.75Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
        PIRVVDNAACLTPTENNFPNTE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]4.08e-15384.81Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIALLLSGATIVD+ VSI+P ENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
         +RV DNAACLTPTENN P+ E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

XP_008441995.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]1.01e-16691.52Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
           VVDNAACLTPTENNFPNTE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]1.66e-15284.45Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIALLLSGATIVD+ VSI+P ENHVPRRE+Q            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
         +RV DNAACLTPTENN P+ E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.49e-15586.22Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQG+S+TAFVTFRDPKALEIALLLSGATIVDQ VSIS  ENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
         +RVVDNAACLTPTENNFP+TE         KMYVNRAQ VVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQNLHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKES VVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein7.9e-12084.81Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIALLLSGATIVD+ VSI+P ENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
         +RV DNAACLTPTENN P+ E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

A0A1S3B5B6 binding partner of ACD11 1-like isoform X13.8e-13091.52Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQ            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
           VVDNAACLTPTENNFPNTE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

A0A1S3CIA3 binding partner of ACD11 1-like2.3e-11984.45Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIALLLSGATIVD+ VSI+P ENHVPRRE+Q            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
         +RV DNAACLTPTENN P+ E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

A0A5A7V2T9 Binding partner of ACD11 1-like isoform X11.3e-13896.75Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
        PIRVVDNAACLTPTENNFPNTE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

A0A5D3BPG7 Binding partner of ACD11 1-like2.3e-11984.45Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIALLLSGATIVD+ VSI+P ENHVPRRE+Q            
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK
         +RV DNAACLTPTENN P+ E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEK
Subjt:  PIRVVDNAACLTPTENNFPNTE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEK

Query:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
        VKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Subjt:  VKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

SwissProt top hitse value%identityAlignment
P87216 Protein vip12.8e-0521.34Show/hide
Query:  VQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDN
        V V ++S   TE++I++FFSF G++ +I  + + GE++TA + F  P A + ALLL  A +    + I+                             D 
Subjt:  VQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDN

Query:  AACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
         A  T  +      +  +        +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K 
Subjt:  AACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT

Query:  RAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKF
            FA   KL+ T S V T  +     A           AG +AG K +  +
Subjt:  RAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKF

Q9LFD5 Binding partner of ACD11 16.6e-4742.47Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ+V I    N+ P                 
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQN
               AA    T+++   +      V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQN
Subjt:  PIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQN

Query:  LHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
          V+++T++   AAE+ +S  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  LHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-5043.58Show/hide
Query:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVD
        TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   ++ A+VTF+D +  E A+LLSGATIVD +V +S   +                +Q  P    +
Subjt:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVD

Query:  NAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDK
          A L P ++N  + +     + +A++VV+++LAKG ++G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQ   VS+K
Subjt:  NAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDK

Query:  TRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
        T++AI AAE+ +S+ GSA+  ++YV   A W+ GAF KVAKA +  G K +EK  +A
Subjt:  TRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 14.7e-4842.47Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ+V I    N+ P                 
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQN
               AA    T+++   +      V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQN
Subjt:  PIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQN

Query:  LHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
          V+++T++   AAE+ +S  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  LHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 13.6e-4842.47Show/hide
Query:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL
        M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ+V I    N+ P                 
Subjt:  MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGL

Query:  PIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQN
               AA    T+++   +      V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQN
Subjt:  PIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQN

Query:  LHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
          V+++T++   AAE+ +S  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  LHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein9.0e-9267.03Show/hide
Query:  TRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRV
        TR+VQV +VS+LATEREI+EFFSFSG+IEHIEIQ E G+SR AFVTF DPKALEIALLLSGATIVDQ V+I+  EN+V RRE Q             +R+
Subjt:  TRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRV

Query:  VDNAACL------TPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVD
        +DNA  L      T T+ N       + YV++AQ+VVA VLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVD
Subjt:  VDNAACL------TPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVD

Query:  QNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV
        Q L VSDKT AAIFAAERKL+DTGSAVK+S+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN++SK++P+
Subjt:  QNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-5141.04Show/hide
Query:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVD
        TV+V +VS  ATER++ EFFSFSG+I ++E Q E   S+ A+VTF+D +  E A+LL+G+TIVD +V+++   ++                  LP   + 
Subjt:  TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVD

Query:  NAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDK
        +   L  +  +   T +      +A++VV+ +++KG V+G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQ   V++K
Subjt:  NAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDK

Query:  TRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV
        T++AI AAE+ +S+ GSA+  ++YV   A W+ GAF +V+KA +  G K +EK  LA      K+  V
Subjt:  TRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGAT
TCAATGTGAACAAGGGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATCGTAGATCAGACTGTGA
GCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTATATTTGAATATATTTCAAGGCTTGCCTATACGGGTTGTGGACAATGCTGCATGT
CTCACTCCTACAGAAAATAATTTTCCTAACACTGAGCAGTGGAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAATGTGCTTGCTAAAGGTTCAGTAATTGGACA
AGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTGACAGAGAAATTGA
CGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAGTGAT
ACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGAACGAAAACTAG
AGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGAT
TCAATGTGAACAAGGGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATCGTAGATCAGACTGTGA
GCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTATATTTGAATATATTTCAAGGCTTGCCTATACGGGTTGTGGACAATGCTGCATGT
CTCACTCCTACAGAAAATAATTTTCCTAACACTGAGCAGTGGAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAATGTGCTTGCTAAAGGTTCAGTAATTGGACA
AGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTGACAGAGAAATTGA
CGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAGTGAT
ACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGAACGAAAACTAG
AGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTAA
Protein sequenceShow/hide protein sequence
MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAAC
LTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSD
TGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA