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IVF0007591 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007591
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:22554713..22554952
RNA-Seq ExpressionIVF0007591
SyntenyIVF0007591
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048405.1 retrotransposon protein [Cucumis melo var. makuwa]1.99e-4394.94Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

KAA0056563.1 retrotransposon protein [Cucumis melo var. makuwa]2.48e-4394.94Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

KAA0057258.1 hypothetical protein E6C27_scaffold280G00930 [Cucumis melo var. makuwa]7.30e-4493.67Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D VDRRGRGEVSETSMLKRY WRSTKQTSNS RLRSGQHATLQMTTTCARNFSAYCVR QNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

TYK08719.1 hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa]4.40e-4493.67Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIW STKQTSNS RLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

TYK27431.1 hypothetical protein E5676_scaffold325G001260 [Cucumis melo var. makuwa]1.00e-4393.67Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQMTTTCARNF AYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

TrEMBL top hitse value%identityAlignment
A0A5A7U437 Retrotransposon protein5.5e-3494.94Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

A0A5A7UHF7 Retrotransposon protein2.8e-3393.67Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVGLD+VDRR RGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQ+TTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

A0A5A7UL03 Retrotransposon protein7.2e-3494.94Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

A0A5D3CED6 Uncharacterized protein3.6e-3393.67Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIW STKQTSNS RLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

A0A5D3DUQ6 Uncharacterized protein3.6e-3393.67Show/hide
Query:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV
        MYVHPDLLALQRVG D+VDRRGRGEVSETS LKRYIWRSTKQTSNS RLRSGQHATLQMTTTCARNF AYCVRCQNLRV
Subjt:  MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACTGGATCGAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGATGTTGAAGCGATACATCTG
GCGCTCGACCAAACAAACGAGCAACTCAGACAGATTGCGGAGTGGCCAACATGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGAT
GCCAGAACTTACGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACTGGATCGAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGATGTTGAAGCGATACATCTG
GCGCTCGACCAAACAAACGAGCAACTCAGACAGATTGCGGAGTGGCCAACATGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGAT
GCCAGAACTTACGAGTTTGA
Protein sequenceShow/hide protein sequence
MYVHPDLLALQRVGLDRVDRRGRGEVSETSMLKRYIWRSTKQTSNSDRLRSGQHATLQMTTTCARNFSAYCVRCQNLRV