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IVF0007614 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007614
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:8577102..8586028
RNA-Seq ExpressionIVF0007614
SyntenyIVF0007614
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035261.1 gag/pol protein [Cucumis melo var. makuwa]2.74e-1789.13Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
        +HKAIKYIYTKQMKEGTS+REHVLDMMMHFN AEVNGGPIN ANQ+
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
KAA0046778.1 gag/pol protein [Cucumis melo var. makuwa]1.98e-1572.73Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ-IYMGEGSSM
        +H+  KYIYTKQMKEGTSIREHVLDMMMHFN  EVN GPIN ANQ + MG+G  +
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ-IYMGEGSSM
KAA0063913.1 gag/pol protein [Cucumis melo var. makuwa]3.03e-1584.44Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ
        +H+A+KYIYTKQMKEGTSIREHVLDMMMHFN AEVN  PIN ANQ
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ
TYJ96612.1 gag/pol protein [Cucumis melo var. makuwa]1.57e-1870.59Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ-IYMGEGSSMALAQQASHFRGKI
        KH+AIKYIYTKQMKEGTS+REHVLDMMMHFN AEVNGGPIN ANQ + MG+G  + +A   S F+ +I
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ-IYMGEGSSMALAQQASHFRGKI
TYK27112.1 gag/pol protein [Cucumis melo var. makuwa]2.08e-1582.61Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
        +H+AIKYIYTKQMKEGTS+REHVLDMMMHFN  EVN GPIN ANQ+
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
TrEMBL top hitse value%identityAlignment
A0A5A7U2U6 Gag/pol protein2.0e-1274.07Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQIYMGEGSSM
        +H+AIKYIYTKQMKEGTS+REHVLDMMMHFN AEVNGGPIN    + M +G  M
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQIYMGEGSSM
A0A5A7V810 Reverse transcriptase9.2e-1382.61Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
        +H+AIKYIYTKQMKEGTS+REHVLDMMMHFN  EVN GPIN ANQ+
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
A0A5D3B9S5 Gag/pol protein3.4e-1570.59Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ-IYMGEGSSMALAQQASHFRGKI
        KH+AIKYIYTKQMKEGTS+REHVLDMMMHFN AEVNGGPIN ANQ + MG+G  + +A   S F+ +I
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQ-IYMGEGSSMALAQQASHFRGKI
A0A5D3C8J9 Gag/pol protein2.2e-1489.13Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
        +HKAIKYIYTKQMKEGTS+REHVLDMMMHFN AEVNGGPIN ANQ+
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
A0A5D3DUD1 Gag/pol protein9.2e-1382.61Show/hide
Query:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
        +H+AIKYIYTKQMKEGTS+REHVLDMMMHFN  EVN GPIN ANQ+
Subjt:  KHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAACACAAAGCAATTAAGTACATTTACACTAAGCAAATGAAGGAAGGGACCTCTATTAGAGAACATGTTCTAGATATGATGATGCACTTCAATACTGCTGAGGT
AAATGGTGGTCCCATCAATGTGGCAAATCAAATCTACATGGGCGAGGGAAGCTCAATGGCACTGGCCCAACAAGCCTCCCATTTTAGGGGTAAAATCGAGTGGATGGCTA
GAGACATAGAGTGCAAGACGGAATTCGCTCATATCCGCTTTAAGGCATTGGAACCCGTGCACAAAGGAAACCCTAAACGCCGCCGCCGTCGGTCGCCGCATCCTTCCCCA
CACCGTCCTCCGTTCGCAGCTGCGAGCAGAAGCAACGCCGTCCGAGTCGGTTTCGTCGTCATCTGCGCCGTCCCGTCGCAAGGCAAGTCGGCAGTCGTTGTCTTCAGCCG
CCCCGATTCGCCATCCGCCGCCCGCTTTTCGCCATCCGTCTTCGTCCCGTCTCCGCCAGCATCTCTGTCGCTGAGCCGTCGATCATCGATAGCCGCCATCCGTAGCCGTT
CGTTTGCCGCGACTTACCCACGAAAAAACCTGGAAACCCGAGCCGCATTGGCTCCACTGTTCCACGCCTCCGGCCGTCCGTGCGCCTCCATAAGTTGCGTGAAGCCGAGC
CGCCAGTTGTCAGTCGCACGCGCGTCCCTGCAAGCCGCGCACGAGGGAGTTGAGCCGTCCCCTCAGCCGAGCACGTACGCGAGCCGTGTGCGTTTCCCCGAGCCGTGTGC
GTCTACCCGAGCCGAACTCTTTACTCTCAATCGAGCCGCCAATTATTTTGAGTCGCCAAGCCTATTTTTGGTTCTTTTCCAACCTATTTTTGTTAAGTTGATTGGTTTTT
TGGCATACCCAATAAAGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAACACAAAGCAATTAAGTACATTTACACTAAGCAAATGAAGGAAGGGACCTCTATTAGAGAACATGTTCTAGATATGATGATGCACTTCAATACTGCTGAGGT
AAATGGTGGTCCCATCAATGTGGCAAATCAAATCTACATGGGCGAGGGAAGCTCAATGGCACTGGCCCAACAAGCCTCCCATTTTAGGGGTAAAATCGAGTGGATGGCTA
GAGACATAGAGTGCAAGACGGAATTCGCTCATATCCGCTTTAAGGCATTGGAACCCGTGCACAAAGGAAACCCTAAACGCCGCCGCCGTCGGTCGCCGCATCCTTCCCCA
CACCGTCCTCCGTTCGCAGCTGCGAGCAGAAGCAACGCCGTCCGAGTCGGTTTCGTCGTCATCTGCGCCGTCCCGTCGCAAGGCAAGTCGGCAGTCGTTGTCTTCAGCCG
CCCCGATTCGCCATCCGCCGCCCGCTTTTCGCCATCCGTCTTCGTCCCGTCTCCGCCAGCATCTCTGTCGCTGAGCCGTCGATCATCGATAGCCGCCATCCGTAGCCGTT
CGTTTGCCGCGACTTACCCACGAAAAAACCTGGAAACCCGAGCCGCATTGGCTCCACTGTTCCACGCCTCCGGCCGTCCGTGCGCCTCCATAAGTTGCGTGAAGCCGAGC
CGCCAGTTGTCAGTCGCACGCGCGTCCCTGCAAGCCGCGCACGAGGGAGTTGAGCCGTCCCCTCAGCCGAGCACGTACGCGAGCCGTGTGCGTTTCCCCGAGCCGTGTGC
GTCTACCCGAGCCGAACTCTTTACTCTCAATCGAGCCGCCAATTATTTTGAGTCGCCAAGCCTATTTTTGGTTCTTTTCCAACCTATTTTTGTTAAGTTGATTGGTTTTT
TGGCATACCCAATAAAGATTTAA
Protein sequenceShow/hide protein sequence
MAKHKAIKYIYTKQMKEGTSIREHVLDMMMHFNTAEVNGGPINVANQIYMGEGSSMALAQQASHFRGKIEWMARDIECKTEFAHIRFKALEPVHKGNPKRRRRRSPHPSP
HRPPFAAASRSNAVRVGFVVICAVPSQGKSAVVVFSRPDSPSAARFSPSVFVPSPPASLSLSRRSSIAAIRSRSFAATYPRKNLETRAALAPLFHASGRPCASISCVKPS
RQLSVARASLQAAHEGVEPSPQPSTYASRVRFPEPCASTRAELFTLNRAANYFESPSLFLVLFQPIFVKLIGFLAYPIKI