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IVF0007618 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007618
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr03:18018531..18019115
RNA-Seq ExpressionIVF0007618
SyntenyIVF0007618
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038069.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]2.53e-2074.63Show/hide
Query:  SSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV
        SSSSP QYP VR+  AGRSKLQ  FVIPSSVVP NHP VRHL HSHLQSQ  VGR SS VD SSS +
Subjt:  SSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV

KAA0042163.1 INO80 complex subunit D-like isoform X1 [Cucumis melo var. makuwa]7.17e-1563.24Show/hide
Query:  ASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV
        ASSSS  QYPAVR+S AG SKLQ  FVIP S +P NHP +RHL HSHLQ Q V+G  S  V+ SSS +
Subjt:  ASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV

KAA0051986.1 gag/pol protein [Cucumis melo var. makuwa]1.47e-7086.86Show/hide
Query:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
        GR    N+R +     S G++   SSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
Subjt:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD

Query:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSVMCEYF
        VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSVMCEYF
Subjt:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSVMCEYF

TYK04573.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.09e-5985.61Show/hide
Query:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
        GR    N+R +     S G++   SSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
Subjt:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD

Query:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSV
        VVGRLSSVVDSSSSVVGHSSSTVELPSSPPS+
Subjt:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSV

TrEMBL top hitse value%identityAlignment
A0A5A7T9Q4 Putative amidohydrolase ytcJ4.6e-1550.41Show/hide
Query:  GRKTETNDRNRTK-----RCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSH
        GR    N+R +       R +S      L     + +T S + SP+        SSSSP QYP VR+  AGRSKLQ  FVIPSSVVP NHP VRHL HSH
Subjt:  GRKTETNDRNRTK-----RCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSH

Query:  LQSQDVVGRLSSVVDSSSSVV
        LQSQ  VGR SS VD SSS +
Subjt:  LQSQDVVGRLSSVVDSSSSVV

A0A5A7UCQ7 Gag/pol protein1.0e-5486.86Show/hide
Query:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
        GR    N+R +     S G++   SSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
Subjt:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD

Query:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSVMCEYF
        VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSVMCEYF
Subjt:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSVMCEYF

A0A5D3BXV2 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-5085.61Show/hide
Query:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
        GR    N+R +     S G++   SSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD
Subjt:  GRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQD

Query:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSV
        VVGRLSSVVDSSSSVVGHSSSTVELPSSPPS+
Subjt:  VVGRLSSVVDSSSSVVGHSSSTVELPSSPPSV

A0A5D3DT82 KAT8 regulatory NSL complex subunit 22.1e-1257.3Show/hide
Query:  PSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV
        PSLTL  + S + +LP     ASSSS  QYPAVR+S AG SKLQ  FVIP S +P NHP +RHL HSHLQ Q V+G  S  V+ SSS +
Subjt:  PSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGTCGAAAAACCGAAACGAACGACCGAAACCGAACGAAACGATGTCGGTCGGGCGGAAAAGAATGCAGGTTGTCGTCGCCTCCCTCTCTCACACTCACCAAATC
GCCATCACCATCTCCGATTCTCCCTCACGGTTTCGCCACCGCAAGTTCGTCATCTCCCTTACAGTATCCCGCCGTTCGTTATTCCGTTGCTGGCCGTTCCAAGCTGCAGT
TTCTGTTCGTCATTCCATCGTCAGTCGTCCCTGACAATCATCCCGTCGTTCGTCATCTCTCTCACAGTCATCTCCAATCGCAAGATGTCGTTGGCCGTTTATCATCTGTC
GTCGACAGTTCATCATCTGTCGTCGGCCATTCATCATCGACCGTCGAGTTGCCCTCTTCGCCGCCGTCGGTAATGTGTGAATATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGTCGAAAAACCGAAACGAACGACCGAAACCGAACGAAACGATGTCGGTCGGGCGGAAAAGAATGCAGGTTGTCGTCGCCTCCCTCTCTCACACTCACCAAATC
GCCATCACCATCTCCGATTCTCCCTCACGGTTTCGCCACCGCAAGTTCGTCATCTCCCTTACAGTATCCCGCCGTTCGTTATTCCGTTGCTGGCCGTTCCAAGCTGCAGT
TTCTGTTCGTCATTCCATCGTCAGTCGTCCCTGACAATCATCCCGTCGTTCGTCATCTCTCTCACAGTCATCTCCAATCGCAAGATGTCGTTGGCCGTTTATCATCTGTC
GTCGACAGTTCATCATCTGTCGTCGGCCATTCATCATCGACCGTCGAGTTGCCCTCTTCGCCGCCGTCGGTAATGTGTGAATATTTTTAA
Protein sequenceShow/hide protein sequence
MVGRKTETNDRNRTKRCRSGGKECRLSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFLFVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSV
VDSSSSVVGHSSSTVELPSSPPSVMCEYF